PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_011096164.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
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Family | GeBP | ||||||||
Protein Properties | Length: 393aa MW: 43748.6 Da PI: 5.9675 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 120.7 | 7.7e-38 | 172 | 267 | 2 | 97 |
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiW 96 lfqrlwse+Deiv+L+G+id+ +k++++p++d++af++f+kk+++++v+++ql +KirrL++K+ ++++k k+gk+ ++sk+h+qk++els+kiW XP_011096164.1 172 LFQRLWSEDDEIVILKGMIDYVTKKKSDPVADLNAFHDFIKKNLHVDVTRTQLQDKIRRLRRKYVNNKSKEKEGKDRTLSKPHEQKAYELSEKIW 266 69********************************************************************************************* PP DUF573 97 g 97 g XP_011096164.1 267 G 267 8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04504 | 5.2E-34 | 173 | 267 | IPR007592 | Protein of unknown function DUF573 |
Sequence ? help Back to Top |
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Protein Sequence Length: 393 aa Download sequence Send to blast |
MAKNREPEKP VESETESGEE EDDIATSEDA GSQDSDSEPD LAQVSKKPLS STQATPKKAQ 60 PQSSSKPQPQ PPSSSDEEES GSESESDSDE PDPNVKPIAS KPMENEQKSS DGARKLRSKP 120 IASDIVTPAR STAAKRPAEE KETETKDAKK SKKKAEPDTS EKKSTDDSKK LLFQRLWSED 180 DEIVILKGMI DYVTKKKSDP VADLNAFHDF IKKNLHVDVT RTQLQDKIRR LRRKYVNNKS 240 KEKEGKDRTL SKPHEQKAYE LSEKIWGNES GKENGVEKVM GSPKVNGSAL RKTPSKRPNT 300 GENEEAKDVK SVEVVNSDPE RLLPAKRVNS GGVTVEERIL RIGAEYFESG KGLEREKEWK 360 KLSVEEIEVY LRQLEVKTAQ AKLVLDAVKS GGH |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_011096164.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011096164.1 | 0.0 | GLABROUS1 enhancer-binding protein-like | ||||
TrEMBL | A0A2Z7D2M7 | 1e-119 | A0A2Z7D2M7_9LAMI; Mediator-associated protein 1 | ||||
STRING | Migut.M01263.1.p | 1e-119 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA3042 | 19 | 47 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G00390.1 | 1e-28 | DNA-binding storekeeper protein-related transcriptional regulator |