PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011095450.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family ERF
Protein Properties Length: 235aa    MW: 25865.9 Da    PI: 7.4129
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011095450.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.44.7e-203078355
             AP2  3 ykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    ++GVr ++ +gr++AeIrd ++    ++r++lg+f++aeeAa+a++ a+++l+g
  XP_011095450.1 30 FRGVRKRP-WGRFAAEIRDpWK----KTRVWLGTFDSAEEAARAYDSAARSLRG 78
                    8*******.**********883....5*************************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000184.96E-312986No hitNo description
SMARTSM003807.9E-372992IPR001471AP2/ERF domain
PROSITE profilePS5103223.3012986IPR001471AP2/ERF domain
PfamPF008472.8E-132978IPR001471AP2/ERF domain
SuperFamilySSF541717.85E-223087IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.101.1E-313086IPR001471AP2/ERF domain
PRINTSPR003671.6E-103041IPR001471AP2/ERF domain
PRINTSPR003671.6E-105268IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 235 aa     Download sequence    Send to blast
MRRGRAPVRQ AEVVHGGEAN GSGGSKEIRF RGVRKRPWGR FAAEIRDPWK KTRVWLGTFD  60
SAEEAARAYD SAARSLRGPK AKTNFPLPPN GTVFPDFNPQ NPNQPQIINN PNDPFMDSRF  120
YSEEHQIIAQ QRPTSSGMSS TVESFSGPRQ PPPPPRPLLM QQQRRHPRSP PVVPDDCHSD  180
CDSSSSVVDD AECDIASSSC KKPLPFDLNM PPPPVDAAAD ADADVDELAC TALRL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A1e-212490976Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways. Probably acts as a transcriptional repressor and may regulate other AtERFs (By similarity). {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00194DAPTransfer from AT1G50640Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011095450.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011095450.11e-172ethylene-responsive transcription factor 3-like
SwissprotQ9SXS85e-61ERF3_TOBAC; Ethylene-responsive transcription factor 3
TrEMBLA0A2G9I2B81e-119A0A2G9I2B8_9LAMI; Uncharacterized protein
STRINGMigut.M01719.1.p1e-109(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA33302347
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50640.14e-30ethylene responsive element binding factor 3