PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011094793.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family ERF
Protein Properties Length: 321aa    MW: 36011.5 Da    PI: 5.1688
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011094793.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2612.6e-19114164155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     ++++GVr++  +g+W+AeIrdp+    r +r++lg+++taeeAa  +++a+ +++g
  XP_011094793.1 114 KKFRGVRQRT-WGKWAAEIRDPV----RrTRVWLGTYDTAEEAAMVYDRAAIQIRG 164
                     59*****999.**********63....45***********************9998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.26E-30114170No hitNo description
Gene3DG3DSA:3.30.730.109.6E-29115171IPR001471AP2/ERF domain
PfamPF008471.3E-12115164IPR001471AP2/ERF domain
SMARTSM003801.9E-34115178IPR001471AP2/ERF domain
SuperFamilySSF541719.15E-21115171IPR016177DNA-binding domain
PROSITE profilePS5103222.273115172IPR001471AP2/ERF domain
PRINTSPR003673.3E-10116127IPR001471AP2/ERF domain
PRINTSPR003673.3E-10138154IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 321 aa     Download sequence    Send to blast
MTTNVKHSVH TTVIPKLVSS PPCLLTSKTT PRLVRISVTD GDATESSGDE CERLIRKHVH  60
EITIQMDTHH FTNNKTHLHQ ETTPNPVKKK KRPASQRPAP PKPAAEHLLE GKGKKFRGVR  120
QRTWGKWAAE IRDPVRRTRV WLGTYDTAEE AAMVYDRAAI QIRGPDAMTN LIKPPERVVE  180
VEAEATAASV SGDDSSKEES CENLCSPTSV LRFSTNGGTV RSEFKNMEHD MENQKSQETK  240
SGSCSLVEPM VGNEGDLLMD DCLPLDQCFL KDYFDFRSPP PMIYDEICLP DKLLEEDVAI  300
DFGDDFGSLT WDVNDLLDDQ F
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A9e-22111178166ATERF1
3gcc_A9e-22111178166ATERF1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011094793.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011094793.10.0pathogenesis-related genes transcriptional activator PTI6
TrEMBLA0A2Z7BUG81e-104A0A2Z7BUG8_9LAMI; Uncharacterized protein
STRINGMigut.B01832.1.p2e-79(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA49423126
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.13e-44cytokinin response factor 4