PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011094665.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family ERF
Protein Properties Length: 272aa    MW: 29938.1 Da    PI: 8.9451
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011094665.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2643.2e-202676256
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                    ++ GVr+++ +grWvAeI+d s   +r r +lg+++t+eeAa+a+++a+++l+ge
  XP_011094665.1 26 RFVGVRQRP-SGRWVAEIKDSS---QRVRLWLGTYDTPEEAARAYDEAARALRGE 76
                    589******.7*********43...36**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008473.2E-152676IPR001471AP2/ERF domain
SMARTSM003805.0E-342695IPR001471AP2/ERF domain
CDDcd000181.72E-302683No hitNo description
PROSITE profilePS5103220.5342683IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.4E-282684IPR001471AP2/ERF domain
SuperFamilySSF541714.84E-202783IPR016177DNA-binding domain
PRINTSPR003672.5E-72738IPR001471AP2/ERF domain
PRINTSPR003672.5E-74965IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    Send to blast
MDGCDATKTT LSTSKVQPAK SASARRFVGV RQRPSGRWVA EIKDSSQRVR LWLGTYDTPE  60
EAARAYDEAA RALRGENART NFASANPIPN QAKSSNSNGA ESEIRHGLSF SSLKAKLSKN  120
LQSIMARNSE NKAAKSRVSD HFTFASIFHF RGYNQYQQNP VDMKKIEKVV QPSVIVPHVP  180
DEPSPWEGSS PDYSSEWASF HHHGFDSDGS DMSDVYSLSE QGFGDQMMGW ISSPEVMSAA  240
AGTEGSRSKR FKVSSSVVVP PTFSERPAHG DW
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A9e-1426821471Ethylene-responsive transcription factor ERF096
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011094665.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011094665.10.0ethylene-responsive transcription factor ERF087-like
TrEMBLA0A2G9HFD51e-149A0A2G9HFD5_9LAMI; Uncharacterized protein
STRINGPOPTR_0014s07280.11e-117(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA125641721
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.11e-17related to AP2 11