PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011094407.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family ERF
Protein Properties Length: 202aa    MW: 21859.6 Da    PI: 5.0353
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011094407.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.71.4e-183887355
             AP2  3 ykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
                    y+GVr++k++g+Wv+eIr+p     r   r++lg+f t+e+Aa a++ a+ +l+g
  XP_011094407.1 38 YRGVRRRKSSGKWVSEIREP-----RtpNRIWLGTFPTPEMAAVAYDVAAFALKG 87
                    9******************9.....4478**********************9988 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103222.7343795IPR001471AP2/ERF domain
SuperFamilySSF541713.01E-203796IPR016177DNA-binding domain
SMARTSM003801.9E-3237101IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.108.7E-293797IPR001471AP2/ERF domain
CDDcd000181.18E-283897No hitNo description
PfamPF008475.2E-123887IPR001471AP2/ERF domain
PRINTSPR003674.6E-83849IPR001471AP2/ERF domain
PRINTSPR003674.6E-87797IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0050832Biological Processdefense response to fungus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 202 aa     Download sequence    Send to blast
MHVQYNKLKY IYTTMSQTPR GRYGGGKSVS DGGGRPMYRG VRRRKSSGKW VSEIREPRTP  60
NRIWLGTFPT PEMAAVAYDV AAFALKGKEA ELNFPSSASS LPVPASTSQR DIQAAAASAA  120
AALGAAGDAL GFGSLETSKI GAAQPEMPVV NEFIDEDLIF DLPNVLANMA QGMLISPPRI  180
DFAEDENDFG GGMQDEYLWN YQ
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A5e-132596473Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011094407.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011094407.11e-148ethylene-responsive transcription factor ERF024-like
SwissprotQ9SJR06e-58ERF24_ARATH; Ethylene-responsive transcription factor ERF024
TrEMBLA0A2G9H8M18e-75A0A2G9H8M1_9LAMI; Uncharacterized protein
STRINGcassava4.1_031718m2e-68(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA55322110
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36450.13e-39ERF family protein