PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_011094016.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
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Family | ERF | ||||||||
Protein Properties | Length: 193aa MW: 19968 Da PI: 4.5277 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 29.6 | 1.7e-09 | 59 | 85 | 29 | 55 |
AP2 29 krfslgkfgtaeeAakaaiaarkkleg 55 r++lg++ taeeAa+a++aa +l+g XP_011094016.1 59 DRIWLGSYETAEEAARAYDAAVFCLRG 85 69***********************99 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51032 | 14.157 | 10 | 93 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 1.1E-11 | 43 | 99 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 5.7E-17 | 57 | 94 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 2.48E-12 | 57 | 94 | IPR016177 | DNA-binding domain |
CDD | cd00018 | 1.93E-17 | 58 | 95 | No hit | No description |
Pfam | PF00847 | 5.7E-5 | 59 | 85 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 193 aa Download sequence Send to blast |
MARDLDSDTR VQASAQTQPY HRPPVLQAVL PSIKNPLSTL TTRASISGGA GPPPPPSRDR 60 IWLGSYETAE EAARAYDAAV FCLRGPSAVL NFPDDPPDIL SAGELSPSQI QVAASKHARR 120 LVAGAPVTAG ELNQPLVGDL FFGEHPELGS SSFGEFQGGE GYLAADGSGK DGGAGDGAAG 180 GGVFFDTSRT WSF |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_011094016.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011094016.1 | 1e-137 | ethylene-responsive transcription factor ERF017-like | ||||
TrEMBL | A0A2G9H070 | 1e-54 | A0A2G9H070_9LAMI; Uncharacterized protein | ||||
STRING | Migut.J00902.1.p | 4e-38 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA21 | 24 | 1165 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G21960.1 | 1e-14 | ERF family protein |