PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011093605.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family FAR1
Protein Properties Length: 239aa    MW: 26162.3 Da    PI: 6.5184
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011093605.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR177.82e-2499187291
            FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                      Y++YA+ +GF+vr+ k+++   ++++ ++t++Cskeg ++++ ++ +    +++etrtgC+a++    +++g+w+v+++++eHnHe+ap
  XP_011093605.1  99 LYCDYAQAMGFNVRRGKQYYFMGTKRVRSKTYCCSKEGVKDDKADT-NAVGYKKPETRTGCRAMISFACDDSGQWKVSRFVKEHNHEMAP 187
                     69***************************************99988.888999**********************************975 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031014.8E-2199187IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 239 aa     Download sequence    Send to blast
MHPKLLNSTA GSAAATSSSS TASVGNQNPV PIAEMENPGF DLEQREAVSG DSDEEGVVRL  60
RSGGEVVDVN EGQDDAHILE LEKKLLEQVV YSEEEAYMLY CDYAQAMGFN VRRGKQYYFM  120
GTKRVRSKTY CCSKEGVKDD KADTNAVGYK KPETRTGCRA MISFACDDSG QWKVSRFVKE  180
HNHEMAPPYA KPLVKSGQAI LAANVYGSGG ALESLLWNLE TRAYGKPGGS IPQRNSKRT
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011093605.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011093605.11e-180protein FAR1-RELATED SEQUENCE 12 isoform X3
TrEMBLA0A4D8YWH61e-116A0A4D8YWH6_SALSN; Uncharacterized protein
STRINGMigut.J01148.1.p1e-123(Erythranthe guttata)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43280.11e-14FAR1 family protein