PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011093423.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family bHLH
Protein Properties Length: 493aa    MW: 55142.2 Da    PI: 5.8023
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011093423.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH40.45.4e-13293339354
                     HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     ++h + Er RR  +N++++ Lr+l+P++     +K++ a+i+  A++YI++L
  XP_011093423.1 293 TKHFATERHRRVLLNDKYQALRKLVPNP-----TKNDRASIVGDAIDYINEL 339
                     78**************************.....9***************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.342290339IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.66E-14291355IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.9E-13293351IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.4E-10293339IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.48E-10293343No hitNo description
SMARTSM003539.1E-10296345IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009555Biological Processpollen development
GO:0048658Biological Processanther wall tapetum development
GO:0052543Biological Processcallose deposition in cell wall
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 493 aa     Download sequence    Send to blast
MYEESAGFDQ NSLHEGGGLV QAEDGFSQTH IPNCNNNNQS FSMEEQSNYP QNQMSQQDVA  60
FSALEMELQH HLNLEMEQCY NNTSSGNHEI QEIVHDSNWQ EMTNFNGENQ YHHQHQPPAD  120
YVQNGHHHHH QQNFTTGSLP ETPYPTTPDL LNMFPLPRCS PSSLLPNSSI TFSNSAHKSP  180
GFLASLGLLG EINTSADGSS ASAGAVVYDP LLPLNLPPQP PLLRELFHSL PHGGYTLGAP  240
RNGTLFGGVD ERDVNVGLYQ NGDHGRSFDH NGVFEFTAGE IDCIGKNRDG KDTKHFATER  300
HRRVLLNDKY QALRKLVPNP TKNDRASIVG DAIDYINELK RTVTELKGWV EKKRCIKERL  360
KRPKTEDDAV MEGNESKSVG EMDNPYNSSS LRSSWLHRKS KNTEVDVRII DDEVTVKLVQ  420
QKRINCLLFV SKVLDELQLD LHHVAGGLIG DYYSFLFNSK ICEGSIVYAS AVANKLIEVV  480
DKQYAAIPPT SSY
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011093423.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKJ0301325e-58KJ030132.1 Sesamum indicum clone TilSSR_1333 microsatellite sesame_1333 sequence.
GenBankKJ0420315e-58KJ042031.1 Sesamum indicum clone TilSSR_13232 microsatellite Sesame_13232 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011093423.10.0transcription factor bHLH91-like
TrEMBLA0A2G9GJM20.0A0A2G9GJM2_9LAMI; Uncharacterized protein
STRINGMigut.N01685.1.p1e-169(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA26962351
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31210.11e-75bHLH family protein