PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_011093384.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
|
||||||||
Family | G2-like | ||||||||
Protein Properties | Length: 84aa MW: 9783.33 Da PI: 7.5117 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 31.6 | 3.6e-10 | 1 | 20 | 36 | 55 |
G2-like 36 mkvkgLtlehvkSHLQkYRl 55 m+ +gLt+ hvkSHLQkYR+ XP_011093384.1 1 MNCNGLTIFHVKSHLQKYRI 20 99*****************7 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 1.1E-8 | 1 | 21 | IPR009057 | Homeodomain-like |
Pfam | PF14379 | 7.5E-10 | 42 | 81 | IPR025756 | MYB-CC type transcription factor, LHEQLE-containing domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 84 aa Download sequence Send to blast |
MNCNGLTIFH VKSHLQKYRI AQLMAEVTEG NSEQLGPKTG LQIVEALRLQ MDVQHRLYEQ 60 LEMRIEEQAK QLQTMIQCQL KQNS |
Cis-element ? help Back to Top | |
---|---|
Source | Link |
PlantRegMap | XP_011093384.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_011093384.2 | 2e-53 | protein PHOSPHATE STARVATION RESPONSE 1-like isoform X5 | ||||
Swissprot | Q0WVU3 | 2e-22 | PHL5_ARATH; Myb family transcription factor PHL5 | ||||
TrEMBL | A0A4D8ZJU6 | 1e-29 | A0A4D8ZJU6_SALSN; Uncharacterized protein | ||||
STRING | XP_002530352.1 | 2e-24 | (Ricinus communis) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G06800.1 | 8e-25 | G2-like family protein |