PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_011093383.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
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Family | G2-like | ||||||||
Protein Properties | Length: 90aa MW: 10496.2 Da PI: 8.7516 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 31.5 | 4e-10 | 1 | 20 | 36 | 55 |
G2-like 36 mkvkgLtlehvkSHLQkYRl 55 m+ +gLt+ hvkSHLQkYR+ XP_011093383.1 1 MNCNGLTIFHVKSHLQKYRI 20 99*****************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 1.3E-8 | 1 | 21 | IPR009057 | Homeodomain-like |
Pfam | PF14379 | 2.2E-16 | 42 | 87 | IPR025756 | MYB-CC type transcription factor, LHEQLE-containing domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 90 aa Download sequence Send to blast |
MNCNGLTIFH VKSHLQKYRI AQLMAEVTEG NSEQLGPKTG LQIVEALRLQ MDVQHRLYEQ 60 LESQKKLQMR IEEQAKQLQT MIQCQLKQNS |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_011093383.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011093383.2 | 3e-57 | protein PHOSPHATE STARVATION RESPONSE 1-like isoform X1 | ||||
Refseq | XP_020553372.1 | 3e-57 | protein PHOSPHATE STARVATION RESPONSE 1-like isoform X2 | ||||
Refseq | XP_020553374.1 | 2e-57 | protein PHOSPHATE STARVATION RESPONSE 1-like isoform X4 | ||||
Swissprot | Q0WVU3 | 4e-26 | PHL5_ARATH; Myb family transcription factor PHL5 | ||||
TrEMBL | A0A4D8ZJU6 | 8e-36 | A0A4D8ZJU6_SALSN; Uncharacterized protein | ||||
STRING | XP_002530352.1 | 1e-28 | (Ricinus communis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA16717 | 4 | 5 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06800.1 | 2e-28 | G2-like family protein |