PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_011092933.1

Organism

Sesamum indicum

Taxonomic ID

4182

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum

Family

Nin-like

Protein Properties

Length: 952aa MW: 105879 Da PI: 7.2539

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_011092933.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	90.7	1.1e-28	634	684	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek+isl++l++yF++++k+AA+++gvc+T+LKriCRq+GI RWP+Rkik++ XP_011092933.1 634 EKSISLQVLRQYFAGSLKEAARSIGVCPTTLKRICRQHGITRWPSRKIKKV 684 799**********************************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	17.075	623	704	IPR003035	RWP-RK domain
Pfam	PF02042	2.6E-24	637	684	IPR003035	RWP-RK domain
SuperFamily	SSF54277	1.01E-22	853	937	No hit	No description
Gene3D	G3DSA:3.10.20.240	1.0E-23	853	935	No hit	No description
SMART	SM00666	4.9E-29	854	937	IPR000270	PB1 domain
PROSITE profile	PS51745	22.263	854	937	IPR000270	PB1 domain
Pfam	PF00564	5.0E-18	854	936	IPR000270	PB1 domain
CDD	cd06407	2.81E-41	855	936	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0005515	Molecular Function	protein binding

Sequence ? help Back to Top
Protein Sequence Length: 952 aa Download sequence Send to blast
MEDGSFTPNI MSPTFSHSNF DFNLMDELLY GGFWLETTDL SNFWHPAAST PLTHFNSTSF 60 SETNIHTLNT DPPHHSFLKE SAISNFFDVP NLSYLGMDEF SETQSHIHEA TTPPASLNQS 120 ANFLVEETHV NTRLWVGPNR NPIRTLSVKK RLVQAISCLK DSISDKDVLI QIWIPVKRGG 180 RQVLTTNNQP FSLNANCKNL ADYRDVSRNY QFAADEDSKD FIGLPGRVFL NKLPEWTPDV 240 RFFKREEYPR VNDAQQHNVR GSLALPVFEQ GSGICLGVVE IVTTSQKVNY RPELENICKA 300 LEAVDLKSSN ILSPSNIENR EESYQGALTE INNVLKFVCN THKLPLAQTW ASCVQQNKGG 360 CRHSVENYAR CVSTIDSACY VADPQVSGFH EACSEHHLLK GEGVAGKAFL TNQPCFAEDI 420 TAFSKTEYPL AHHARVFHLC ASAAIRLRST YNRTADFVLE FFLPLNCKDT QHQMRMLNLL 480 SSVIQQTCQS LQVITDQELA QETLGRERSN TSAGRLDDEK KHPKLVISPS KQDLLDGSPW 540 IAASRVDSQQ KGKGIAVSFS NRMEEPEREF KLTTQWDNSG SDFQNVPAVL EHDELQRDSG 600 PRRSGEGGGS FSLTIGHLPL GAQTSSERRR TKTEKSISLQ VLRQYFAGSL KEAARSIGVC 660 PTTLKRICRQ HGITRWPSRK IKKVGHSLRK LQLVIDSVHG TDGSIQLSSF YNNFPELVPP 720 NVPGSSHFST STMSGNLQQV TSQPDGTLLS PATTASKSPS SSGSHSSSSS YFCSTGVKQS 780 SNPVKVSSLG DALSAEETRG MLKRTRSEAK LHEKGQEEAK PLIRSYSYKI FSDHTAIAAP 840 AVPNDINQAH HVGTFRVKAV FGEEKIRFSL QPHWGFKDLK QEVLRRINID NGGSINLKYL 900 DDDAEWVLLT CDADLEECID LHRSSQSRTI KLSVNQACGS HIQGSFRSEG PS

Sequence ? help Back to Top

Protein Sequence Length: 952 aa Download sequence Send to blast

MEDGSFTPNI MSPTFSHSNF DFNLMDELLY GGFWLETTDL SNFWHPAAST PLTHFNSTSF  60
SETNIHTLNT DPPHHSFLKE SAISNFFDVP NLSYLGMDEF SETQSHIHEA TTPPASLNQS  120
ANFLVEETHV NTRLWVGPNR NPIRTLSVKK RLVQAISCLK DSISDKDVLI QIWIPVKRGG  180
RQVLTTNNQP FSLNANCKNL ADYRDVSRNY QFAADEDSKD FIGLPGRVFL NKLPEWTPDV  240
RFFKREEYPR VNDAQQHNVR GSLALPVFEQ GSGICLGVVE IVTTSQKVNY RPELENICKA  300
LEAVDLKSSN ILSPSNIENR EESYQGALTE INNVLKFVCN THKLPLAQTW ASCVQQNKGG  360
CRHSVENYAR CVSTIDSACY VADPQVSGFH EACSEHHLLK GEGVAGKAFL TNQPCFAEDI  420
TAFSKTEYPL AHHARVFHLC ASAAIRLRST YNRTADFVLE FFLPLNCKDT QHQMRMLNLL  480
SSVIQQTCQS LQVITDQELA QETLGRERSN TSAGRLDDEK KHPKLVISPS KQDLLDGSPW  540
IAASRVDSQQ KGKGIAVSFS NRMEEPEREF KLTTQWDNSG SDFQNVPAVL EHDELQRDSG  600
PRRSGEGGGS FSLTIGHLPL GAQTSSERRR TKTEKSISLQ VLRQYFAGSL KEAARSIGVC  660
PTTLKRICRQ HGITRWPSRK IKKVGHSLRK LQLVIDSVHG TDGSIQLSSF YNNFPELVPP  720
NVPGSSHFST STMSGNLQQV TSQPDGTLLS PATTASKSPS SSGSHSSSSS YFCSTGVKQS  780
SNPVKVSSLG DALSAEETRG MLKRTRSEAK LHEKGQEEAK PLIRSYSYKI FSDHTAIAAP  840
AVPNDINQAH HVGTFRVKAV FGEEKIRFSL QPHWGFKDLK QEVLRRINID NGGSINLKYL  900
DDDAEWVLLT CDADLEECID LHRSSQSRTI KLSVNQACGS HIQGSFRSEG PS

Functional Description ? help Back to Top
Source	Description
UniProt	Probable transcription factor. {ECO:0000250}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	XP_011092933.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011092933.1	0.0	protein NLP2
Swissprot	Q7X9B9	0.0	NLP2_ARATH; Protein NLP2
TrEMBL	A0A2G9G5I6	0.0	A0A2G9G5I6_9LAMI; Uncharacterized protein
TrEMBL	A0A2G9HB62	0.0	A0A2G9HB62_9LAMI; Uncharacterized protein
STRING	Migut.B00011.1.p	0.0	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA1598	24	67

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35270.1	0.0	Nin-like family protein