PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011092742.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family G2-like
Protein Properties Length: 400aa    MW: 44307.7 Da    PI: 7.781
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011092742.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like1031.8e-32262317156
         G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 
                     k+r++W+peLH+rFv+a+++LGG++ AtPk+i+elm+v+gLt+++vkSHLQkYRl+
  XP_011092742.1 262 KQRRCWSPELHRRFVNALQHLGGAQAATPKQIRELMQVDGLTNDEVKSHLQKYRLH 317
                     79****************************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466895.82E-18259320IPR009057Homeodomain-like
PROSITE profilePS5129414.139259319IPR017930Myb domain
Gene3DG3DSA:1.10.10.603.2E-29260320IPR009057Homeodomain-like
TIGRFAMsTIGR015572.2E-27262317IPR006447Myb domain, plants
PfamPF002492.1E-7264315IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 400 aa     Download sequence    Send to blast
MGSLIPPELT LDCSRPSETW VPKTTGEFLA EVSGIQSASE KVLKLDRYVS RLQDEMKKID  60
AFKRELPLCM LLLNDAIATV KEELMQCKKS NAEPVLEEFI PLKKNSAGEE KDETNEGGKE  120
KEIVNNSEKM NWMSSVQLWN SDNNYNLSDP KLDSNKKRKE EVINRPAMDD LFPSSKNRAR  180
GRAFAPFKGC PNFPVVPMGK EGRDELPGAP SLSLRTPEIN NSKDEIYCSG LSSKSSSSRS  240
GSSSATNGQS SLKTVHQQTA RKQRRCWSPE LHRRFVNALQ HLGGAQAATP KQIRELMQVD  300
GLTNDEVKSH LQKYRLHTRK VPPTTNISTN QPVLLGGLWM SQEQCGESSK PSNSQSGSPQ  360
GPLHLPGSSR GTSVTGGDSM VDEDDERSES RNYLSGRDDV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1149158PKLDSNKKRK
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011092742.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011092742.10.0myb family transcription factor EFM
TrEMBLA0A4D9BXT91e-165A0A4D9BXT9_SALSN; Uncharacterized protein
STRINGVIT_03s0063g01060.t011e-136(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA43612443
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G03500.11e-57G2-like family protein