PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_011092331.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
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Family | bZIP | ||||||||
Protein Properties | Length: 374aa MW: 41982.5 Da PI: 9.1267 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 25 | 4.2e-08 | 241 | 280 | 17 | 56 |
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 17 ArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 A+rsR RK+++i+eLe+ v++L+ae ++ ele l+++ XP_011092331.1 241 AQRSRVRKLQYIAELERNVQALQAEGSEVSAELEFLNQQN 280 89*******************************9999886 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 5.3E-5 | 230 | 289 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14703 | 1.04E-16 | 232 | 280 | No hit | No description |
SuperFamily | SSF57959 | 5.91E-6 | 241 | 284 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 5.2E-8 | 241 | 283 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 374 aa Download sequence Send to blast |
MANSKGSSTM RNMMYNGKNS LLPPKCPFPS LPPSYDEYIP TSVIGPKAPQ KPRHGNSHHQ 60 RTSSESFLLE EQPSWLDELL NEPEPPVRRG GHRRSSSDSF AYIDTANVGS MNYVAQDDNK 120 LINMTPLSSW GSQDFDFYKG IQHSSFYANL NPSGKTKNKP WNTPISSVAP PRGRPSPRDT 180 AIVPNAGSLS TSQDADRDPT SLSEKQEDVE SGPKGSSGKD STHVKSSASE TDTKRAKQQF 240 AQRSRVRKLQ YIAELERNVQ ALQAEGSEVS AELEFLNQQN LILTMENKAL KQRLDSLSQE 300 QLIKYMEHEV LEREVARLRS LYHQQQQPQQ QQQPMSSSHR RAKSRDLDQQ FTNLSLKHKE 360 ATAGHDPVSS QLHT |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_011092331.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | KJ036144 | 3e-56 | KJ036144.1 Sesamum indicum clone TilSSR_7345 microsatellite sesame_7345 sequence. | |||
GenBank | KJ069382 | 3e-56 | KJ069382.1 Sesamum indicum clone TilSSR_40583 microsatellite Sesame_40583 sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011092330.1 | 0.0 | uncharacterized protein At4g06598 | ||||
Refseq | XP_011092333.1 | 0.0 | uncharacterized protein At4g06598 | ||||
TrEMBL | A0A2G9GBP7 | 0.0 | A0A2G9GBP7_9LAMI; Uncharacterized protein | ||||
STRING | cassava4.1_009724m | 1e-167 | (Manihot esculenta) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G58110.2 | 3e-92 | bZIP family protein |