PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011092330.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family bZIP
Protein Properties Length: 374aa    MW: 41982.5 Da    PI: 9.1267
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011092330.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1254.2e-082412801756
                     HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1  17 ArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 
                     A+rsR RK+++i+eLe+ v++L+ae ++   ele l+++ 
  XP_011092330.1 241 AQRSRVRKLQYIAELERNVQALQAEGSEVSAELEFLNQQN 280
                     89*******************************9999886 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003385.3E-5230289IPR004827Basic-leucine zipper domain
CDDcd147031.04E-16232280No hitNo description
SuperFamilySSF579595.91E-6241284No hitNo description
Gene3DG3DSA:1.20.5.1705.2E-8241283No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 374 aa     Download sequence    Send to blast
MANSKGSSTM RNMMYNGKNS LLPPKCPFPS LPPSYDEYIP TSVIGPKAPQ KPRHGNSHHQ  60
RTSSESFLLE EQPSWLDELL NEPEPPVRRG GHRRSSSDSF AYIDTANVGS MNYVAQDDNK  120
LINMTPLSSW GSQDFDFYKG IQHSSFYANL NPSGKTKNKP WNTPISSVAP PRGRPSPRDT  180
AIVPNAGSLS TSQDADRDPT SLSEKQEDVE SGPKGSSGKD STHVKSSASE TDTKRAKQQF  240
AQRSRVRKLQ YIAELERNVQ ALQAEGSEVS AELEFLNQQN LILTMENKAL KQRLDSLSQE  300
QLIKYMEHEV LEREVARLRS LYHQQQQPQQ QQQPMSSSHR RAKSRDLDQQ FTNLSLKHKE  360
ATAGHDPVSS QLHT
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011092330.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKJ0361443e-56KJ036144.1 Sesamum indicum clone TilSSR_7345 microsatellite sesame_7345 sequence.
GenBankKJ0693823e-56KJ069382.1 Sesamum indicum clone TilSSR_40583 microsatellite Sesame_40583 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011092330.10.0uncharacterized protein At4g06598
RefseqXP_011092333.10.0uncharacterized protein At4g06598
TrEMBLA0A2G9GBP70.0A0A2G9GBP7_9LAMI; Uncharacterized protein
STRINGcassava4.1_009724m1e-167(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA27651733
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G58110.23e-92bZIP family protein