PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011091824.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family ARR-B
Protein Properties Length: 442aa    MW: 50125.8 Da    PI: 4.9924
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011091824.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like60.14.6e-19208257555
         G2-like   5 rWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                     +Wt+eLH++F++av qL G+    P++ilelm+ +gLt+ +v+SHLQk R 
  XP_011091824.1 208 EWTEELHDKFMNAVLQL-GEGSCYPREILELMNEPGLTRMQVASHLQKCRN 257
                     7****************.99****************************995 PP
2Response_reg24.91e-09301322105
                     EEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTE CS
    Response_reg   2 livdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGa 94 
                     l+v+ +    +   ++l+   y +v++++ ++ a+ +l + +  +Dl++  i+ p++ G++ll+  ++ +  l +i+++++++  ++  al+ Ga
  XP_011091824.1  30 LLVEHDSEDHDKAISMLQYFSY-KVTAVKLASTAVSILSKGKakFDLVMANINSPDLYGFQLLQDATKMD--LLVILMSDEDDAITTMLALEQGA 121
                     6664444444444568899999.9**************888778********************988866..*********************** PP

                     SEEEESS--HH CS
    Response_reg  95 kdflsKpfdpe 105
                       +  Kp  ++
  XP_011091824.1 122 LFCTKKPLTMQ 132
                     99999997765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF521724.55E-1425145IPR011006CheY-like superfamily
Gene3DG3DSA:3.40.50.23003.0E-1826162No hitNo description
SMARTSM004480.001827138IPR001789Signal transduction response regulator, receiver domain
PROSITE profilePS5011023.13928142IPR001789Signal transduction response regulator, receiver domain
PfamPF000726.9E-529133IPR001789Signal transduction response regulator, receiver domain
PROSITE profilePS512949.843201260IPR017930Myb domain
SuperFamilySSF466898.78E-14203256IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.607.1E-19204257IPR009057Homeodomain-like
TIGRFAMsTIGR015571.3E-18207257IPR006447Myb domain, plants
PfamPF002491.6E-6208255IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 442 aa     Download sequence    Send to blast
MKDLVVHHSF EASPISTAFL PNMAHRMHVL LVEHDSEDHD KAISMLQYFS YKVTAVKLAS  60
TAVSILSKGK AKFDLVMANI NSPDLYGFQL LQDATKMDLL VILMSDEDDA ITTMLALEQG  120
ALFCTKKPLT MQTVRYLWQH VIREKTGKMR GDERLRAIAD CNMVQNKLGQ DLMLSNQDVG  180
KEHKSKKKVK TGTAQHDYAA FKKKVWTEWT EELHDKFMNA VLQLGEGSCY PREILELMNE  240
PGLTRMQVAS HLQKCRNANL LPSDDLRKLK PANAEAKPPK NKAPRTKKVN FGAMPRMSNH  300
QSHLQENHDN NQPDSIIGLP IEGNMAGDNY YNLDQNNETF NMGQFEQTFC MDELFMEGVQ  360
SVTPASSYQN DIAEDVFEFP NMDVMVHDFS GLIEELGMDY DASFESVFLH QNEVPSTGEW  420
SFEVTKSGNA EEEIEGQTRE EE
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011091824.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011091824.10.0two-component response regulator ORR26-like
TrEMBLA0A022RVJ01e-103A0A022RVJ0_ERYGU; Uncharacterized protein
STRINGMigut.N01841.1.p1e-104(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8132384
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16110.11e-30response regulator 2