PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011091822.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family ARR-B
Protein Properties Length: 462aa    MW: 52829.7 Da    PI: 5.2624
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011091822.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like65.87.4e-21207255554
         G2-like   5 rWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYR 54 
                     +Wt+eLHe+F++av+ L G+ +  P++ilelm+v+gLt+ +v+SHLQk R
  XP_011091822.1 207 EWTQELHEKFMDAVRML-GEGRCYPREILELMNVPGLTRMQVASHLQKCR 255
                     7****************.9*****************************98 PP
2Response_reg27.71.4e-10171165105
                     SSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTESEE CS
    Response_reg   5 dDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGakdf 97 
                     d + +      ++l+   y +v+ ++ ++ al +l + +  +Dl++  i+ p++ G++ll+e  + +  lp++++ ++++  ++++al+ Ga  +
  XP_011091822.1  17 DHDINHHGPAIEILQYFSY-KVTIVKLASVALSILSRGNprFDLLMENINSPDLCGFKLLQEAVNMD--LPVVLLLDEDDIVLTKRALEGGAFLC 108
                     4444444455678889999.***************988888********************988866..************************** PP

                     EESS--HH CS
    Response_reg  98 lsKpfdpe 105
                     + Kp  +e
  XP_011091822.1 109 IKKPLTIE 116
                     ****9876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.40.50.23001.2E-1310140No hitNo description
SuperFamilySSF521721.85E-1211134IPR011006CheY-like superfamily
SMARTSM004480.007911125IPR001789Signal transduction response regulator, receiver domain
PROSITE profilePS5011022.58912126IPR001789Signal transduction response regulator, receiver domain
PfamPF000725.9E-513116IPR001789Signal transduction response regulator, receiver domain
CDDcd001561.94E-714133No hitNo description
PROSITE profilePS5129411.196198259IPR017930Myb domain
SuperFamilySSF466892.15E-15202255IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.608.5E-20205255IPR009057Homeodomain-like
TIGRFAMsTIGR015575.7E-18206256IPR006447Myb domain, plants
PfamPF002492.4E-7207254IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 462 aa     Download sequence    Send to blast
MSMAQSMTCR IHVLLVDHDI NHHGPAIEIL QYFSYKVTIV KLASVALSIL SRGNPRFDLL  60
MENINSPDLC GFKLLQEAVN MDLPVVLLLD EDDIVLTKRA LEGGAFLCIK KPLTIETAKY  120
LWQHVLREKV RKVKENERFK EFVMHNKLHD EFGEEDPMRG YINDYMNSDE NYVSNKKVRY  180
TKIANEDEET SPQHRDVAKF RKKVWTEWTQ ELHEKFMDAV RMLGEGRCYP REILELMNVP  240
GLTRMQVASH LQKCRRGTWQ SPDERKCKIV MPKMNLPQTS GRAKPRKFGS MPHIGQQDHD  300
NIADFIFYSS MGNKMPGDNG EGNSYERYSN RFSQVGLETL NVAQIGLSLG MDDEAFMSNE  360
QFVFDAQSVT PSINTSLDQK NTAEDYYEFP NIDCMIQNLS ASQQEQKVES SGGQDAFDLN  420
PVYSNQSFSH LQGPVLDATI TTQGNEAAIA NNGETEDQKR EE
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011091822.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011091822.10.0two-component response regulator ARR14-like isoform X1
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8132384
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16110.11e-27response regulator 2