PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011091699.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family ERF
Protein Properties Length: 419aa    MW: 46177.6 Da    PI: 7.6889
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011091699.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.11e-18246294355
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     ++GVr+++ +g+WvAeIr p++   r+r++lg+f+taeeAa a++ a+  l+g
  XP_011091699.1 246 FRGVRQRH-WGKWVAEIRLPRN---RTRVWLGTFDTAEEAAFAYDTAAYILRG 294
                     8******9.**********955...5**********************99987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000185.02E-30244304No hitNo description
SuperFamilySSF541712.88E-22245303IPR016177DNA-binding domain
PROSITE profilePS5103222.26245302IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.106.0E-31245303IPR001471AP2/ERF domain
SMARTSM003804.3E-33245308IPR001471AP2/ERF domain
PfamPF008471.6E-11246293IPR001471AP2/ERF domain
PRINTSPR003671.5E-10246257IPR001471AP2/ERF domain
PRINTSPR003671.5E-10268284IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 419 aa     Download sequence    Send to blast
METFLQNEIP SCLEMERGSR SLLYSNVFRS LNETVRSDGG SGDGGGGKAR SSSSSSPERS  60
LLSSSESSSP VNEVGSDTML NARLSELSKE NIARELHAHS VLPGFTQTGG GNYVPLNFLE  120
SFQSSNGVKH SDPCSSPSSS VSSRIPNLGL FLHDPFPVKS ESLPTAKTRD HAPFPENPLF  180
SVSQFDRNQL DPESKWLKIS QKVSNHPSKG FSDYWLSTTK TQPMKFPASR KSQQKTCSPS  240
SPGKLFRGVR QRHWGKWVAE IRLPRNRTRV WLGTFDTAEE AAFAYDTAAY ILRGDYANLN  300
FPDLKHQIKA NPMNNNTAAL LETKLRAISQ GMVASKKGFN APQSSSSSPQ HKPVLEEDLN  360
QKSAEKEWAL EVESRVGSEA MEMKKSAETM GSDADAVQLS RMPSLDMDMI WDALLVSDY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A9e-19241302163ATERF1
3gcc_A9e-19241302163ATERF1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011091699.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKJ0490993e-56KJ049099.1 Sesamum indicum clone TilSSR_20300 microsatellite Sesame_20300 sequence.
GenBankKJ0555183e-56KJ055518.1 Sesamum indicum clone TilSSR_26719 microsatellite Sesame_26719 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011091699.10.0ethylene-responsive transcription factor ERF062
TrEMBLA0A068URR21e-117A0A068URR2_COFCA; Uncharacterized protein
STRINGGorai.011G157500.11e-110(Gossypium raimondii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA109211825
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13620.17e-61ERF family protein