PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011091638.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family bZIP
Protein Properties Length: 434aa    MW: 47572.5 Da    PI: 6.5132
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011091638.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.34.6e-10232290563
                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                     kr++r   NR +A rs +RK  +i+eLe+kv++L++e ++L  +l  l+     l++e+
  XP_011091638.1 232 KRAKRIWANRQSAARSKERKMRYIAELERKVQTLQTEATSLSAQLTLLQRDTNGLTAEN 290
                     9*********************************************9998888777776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003389.8E-16228292IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.932230293IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.7E-10232286No hitNo description
PfamPF001701.0E-8232286IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.13E-10232283No hitNo description
CDDcd147036.20E-25233282No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 434 aa     Download sequence    Send to blast
MDKDKSHHGS GSLLPPSGRY SVFSPPNSSY GVKSEQSGPS NLPPLGPGSS SEQGHFGHGL  60
QSDSSRFSHD ISRMPDNPPK NLGHRRAHSE ILTLPDDISF DSDLGVVGGF DGPSFSDETE  120
EDLLSMYLDM DKFNSTSATS SFQVGESSAS LAADPGSSSA PGSALPNQSA DNVAQAVSEK  180
PRIRHQHSQS MDGSTTIKPE MLMSGAEEPS QADSKKAMSA AKLAELALID PKRAKRIWAN  240
RQSAARSKER KMRYIAELER KVQTLQTEAT SLSAQLTLLQ RDTNGLTAEN SELKLRLQTM  300
EQQVHLQDAL NDALKEEIQH LKVLTGQTIA NGGAMMNFPT SYGSSQQYYA NNHAVHTLLT  360
AQQLQQLQIH SQKQQQQQHQ FQQHQLHQFQ QQQMQHQQPQ SSMQQQEPTG DMKLKNSMSP  420
SVQKDLSSDA SSKD
Functional Description ? help Back to Top
Source Description
UniProtPutative transcription factor with an activatory role.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00126DAPTransfer from AT1G06070Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011091638.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011091638.10.0probable transcription factor PosF21
RefseqXP_011091639.10.0probable transcription factor PosF21
SwissprotQ040881e-151POF21_ARATH; Probable transcription factor PosF21
TrEMBLA0A2G9GFX20.0A0A2G9GFX2_9LAMI; Uncharacterized protein
STRINGMigut.G01348.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA39652137
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G06070.11e-158bZIP family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Xu C, et al.
    Control of auxin-induced callus formation by bZIP59-LBD complex in Arabidopsis regeneration.
    Nat Plants, 2018. 4(2): p. 108-115
    [PMID:29358751]