PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_011091607.1

Organism

Sesamum indicum

Taxonomic ID

4182

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum

Family

Nin-like

Protein Properties

Length: 967aa MW: 107708 Da PI: 6.5389

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_011091607.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	91	9.2e-29	583	633	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek+ sl++l++yFs+++kdAAk+Lgvc+T+LKriCRq+GI+RWP+Rki+++ XP_011091607.1 583 EKHFSLSVLQQYFSGSLKDAAKSLGVCPTTLKRICRQHGISRWPSRKINKV 633 7999*********************************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	16.779	572	653	IPR003035	RWP-RK domain
Pfam	PF02042	1.4E-26	587	633	IPR003035	RWP-RK domain
SuperFamily	SSF54277	1.01E-21	865	955	No hit	No description
Gene3D	G3DSA:3.10.20.240	5.8E-21	867	949	No hit	No description
SMART	SM00666	1.0E-22	870	952	IPR000270	PB1 domain
PROSITE profile	PS51745	21.954	870	952	IPR000270	PB1 domain
Pfam	PF00564	1.2E-17	871	951	IPR000270	PB1 domain
CDD	cd06407	6.50E-32	871	951	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0005515	Molecular Function	protein binding

Sequence ? help Back to Top
Protein Sequence Length: 967 aa Download sequence Send to blast
MDGMVVTSME ESLRGSNLGD ALSNVVELMN YESCDGWHNS PGDLSNQMFP CLAMPSASPT 60 NSGPLDRLIF MEQYISRNFV KDSDVTGGLL PGGDRMMFQQ MERQFPFLMD STDDTIEVME 120 MGDISSRKLN ATANIGNGVI PRPLRPSLNE KMLRALHLFK EWSGGGILAQ VWAPMKNGGN 180 YILTTCEQPC LHDQKLSGYR EVSRLFTFAA EPSPGSFPGL PGRVFTSKIP EWTSNVIYYN 240 KAEYLRIQYA IDHEVRGSIA LPVFEDDSLD RSCCAVLELV TTKEKPNFDL EMEHICRALQ 300 AVDLSSTQPP RLPSQSLSKN HKAALAEITA VLRAICHAHR LPLAQTWIPC SYKADSGCET 360 VRVRGQNTSP SEKYVLFIEE TACYWGDTNM YGFVHACSKH YLEEGQGVVG KSFQSNQPFF 420 YPDVKEYHIT EYPLVHHARR FGLNAAVAIR LRSTYTGDDD YILEFFLPVN MKGRIEQQLL 480 LNNLSNTMQK LCTSLRKVSD AELLGTNNCK VRLPDGATKD GSTFASFMKS SEPSLIIDNL 540 KSVGRAPEHI SVSKTKEIKD DGPPEQTMVR LKRQVEKKRS TSEKHFSLSV LQQYFSGSLK 600 DAAKSLGVCP TTLKRICRQH GISRWPSRKI NKVHRSLKKI QSVLESVHGV ERGLKFDPNT 660 GGLITAGSYL QEFDTSKSFL LTNTGSLSKQ PHSIIQNTIS TSSTSCFSSE ATDVKIKEEY 720 GQHVRCSLNE KCKPKDNLVE TFDNSRLAAL DTGPSWPASL NTVPWTTSSM GPVEFFLSKE 780 HNGWEVCGGN IGAEGYESRL ISGCSSAIFA TNEIDTRLKG STIVDGDDVV VEHSHPTSVM 840 TDSSNSCSTR SCDEKAPPKN EVSCGDSGTK ITVKAVYRDD TIRFKFEPSR GCFELYEEVG 900 KRFRLERGQF QLKYRDDDEE WVMLVNDSDL HECLEILDFL GTHTVKFLVR DVPSATGSSG 960 STNYFSS

Sequence ? help Back to Top

Protein Sequence Length: 967 aa Download sequence Send to blast

MDGMVVTSME ESLRGSNLGD ALSNVVELMN YESCDGWHNS PGDLSNQMFP CLAMPSASPT  60
NSGPLDRLIF MEQYISRNFV KDSDVTGGLL PGGDRMMFQQ MERQFPFLMD STDDTIEVME  120
MGDISSRKLN ATANIGNGVI PRPLRPSLNE KMLRALHLFK EWSGGGILAQ VWAPMKNGGN  180
YILTTCEQPC LHDQKLSGYR EVSRLFTFAA EPSPGSFPGL PGRVFTSKIP EWTSNVIYYN  240
KAEYLRIQYA IDHEVRGSIA LPVFEDDSLD RSCCAVLELV TTKEKPNFDL EMEHICRALQ  300
AVDLSSTQPP RLPSQSLSKN HKAALAEITA VLRAICHAHR LPLAQTWIPC SYKADSGCET  360
VRVRGQNTSP SEKYVLFIEE TACYWGDTNM YGFVHACSKH YLEEGQGVVG KSFQSNQPFF  420
YPDVKEYHIT EYPLVHHARR FGLNAAVAIR LRSTYTGDDD YILEFFLPVN MKGRIEQQLL  480
LNNLSNTMQK LCTSLRKVSD AELLGTNNCK VRLPDGATKD GSTFASFMKS SEPSLIIDNL  540
KSVGRAPEHI SVSKTKEIKD DGPPEQTMVR LKRQVEKKRS TSEKHFSLSV LQQYFSGSLK  600
DAAKSLGVCP TTLKRICRQH GISRWPSRKI NKVHRSLKKI QSVLESVHGV ERGLKFDPNT  660
GGLITAGSYL QEFDTSKSFL LTNTGSLSKQ PHSIIQNTIS TSSTSCFSSE ATDVKIKEEY  720
GQHVRCSLNE KCKPKDNLVE TFDNSRLAAL DTGPSWPASL NTVPWTTSSM GPVEFFLSKE  780
HNGWEVCGGN IGAEGYESRL ISGCSSAIFA TNEIDTRLKG STIVDGDDVV VEHSHPTSVM  840
TDSSNSCSTR SCDEKAPPKN EVSCGDSGTK ITVKAVYRDD TIRFKFEPSR GCFELYEEVG  900
KRFRLERGQF QLKYRDDDEE WVMLVNDSDL HECLEILDFL GTHTVKFLVR DVPSATGSSG  960
STNYFSS

Cis-element ? help Back to Top
Source	Link
PlantRegMap	XP_011091607.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011091607.1	0.0	protein NLP9 isoform X1
Refseq	XP_011091608.1	0.0	protein NLP9 isoform X1
TrEMBL	A0A2G9GDZ0	0.0	A0A2G9GDZ0_9LAMI; Uncharacterized protein
STRING	XP_009795771.1	0.0	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA3981	24	45

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G43500.2	0.0	Nin-like family protein