PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011090514.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family EIL
Protein Properties Length: 475aa    MW: 53703.6 Da    PI: 4.9314
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011090514.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3396.92.6e-121313561353
                     XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
            EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraWW 95 
                     ++lk+rmwkd+m++++lk ++               s    eq+rrkkmsraQD+iLkYM+k+mevcnaqGfvYgi++ekgkpv+g+sdsLr+WW
  XP_011090514.1  31 DDLKQRMWKDRMRMQKLKAKRDVD---------VPPSAAKLEQSRRKKMSRAQDAILKYMVKIMEVCNAQGFVYGIVSEKGKPVTGSSDSLREWW 116
                     79*************888777753.........34445568****************************************************** PP

                     XXXXXXXXXXXXXXXXX...XXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT-- CS
            EIN3  96 kekvefdrngpaaisky...qaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelgls 187
                     kekv+fd+ +paai+       ++++++ + + + +++s+ h l+elqDTtlgSLLsalmqhc ppqrrfple+g++pPWWP+G+elwwg +gl+
  XP_011090514.1 117 KEKVRFDQHAPAAIAAFlpkIVEEAAAAAAADFELDPTSYMHLLEELQDTTLGSLLSALMQHCVPPQRRFPLERGLPPPWWPKGNELWWGDQGLA 211
                     ***************998875566666666777889*********************************************************** PP

                     TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXXXXXXXXXXXXXXXXXXX CS
            EIN3 188 kdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsahssslrkqspkvtlsceqke 282
                     +++g+ppy+kphdlkkawkv+vL+avikhm+p+++++r+ + qsk lqdkm+a++++++++v+nqee ++          +  ++++ + +e+++
  XP_011090514.1 212 HEHGPPPYRKPHDLKKAWKVTVLAAVIKHMAPNLSRMRRVVSQSKTLQDKMTARDTATWSKVVNQEEVLL----------KLTEKALRITEENED 296
                     ******************************************************************9866..........336677888888776 PP

                     XXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX......XXXXXXX.XXXXXXXXXXXXXXXX CS
            EIN3 283 dvegkkeskikhvqavkttagfpvvrkrkkkpsesakvsskevsrtcqssqfrgsetelifadknsisqne 353
                     d++++  +         + + +   +krk  ++ +++        tcq+s++++s  e  f+dk+s++++e
  XP_011090514.1 297 DQQKTGGQT--------ESNLIGSGEKRKCSFDPETTFDP---LXTCQNSKCPNSCIEWAFSDKTSRTNHE 356
                     666333333........22346678888866665665544...589***********************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048731.1E-11431278No hitNo description
Gene3DG3DSA:1.10.3180.102.6E-65155282IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167686.15E-58157280IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0080167Biological Processresponse to karrikin
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 475 aa     Download sequence    Send to blast
MVDFHGEIGP PSPTSSVELQ DVSEDEGISY DDLKQRMWKD RMRMQKLKAK RDVDVPPSAA  60
KLEQSRRKKM SRAQDAILKY MVKIMEVCNA QGFVYGIVSE KGKPVTGSSD SLREWWKEKV  120
RFDQHAPAAI AAFLPKIVEE AAAAAAADFE LDPTSYMHLL EELQDTTLGS LLSALMQHCV  180
PPQRRFPLER GLPPPWWPKG NELWWGDQGL AHEHGPPPYR KPHDLKKAWK VTVLAAVIKH  240
MAPNLSRMRR VVSQSKTLQD KMTARDTATW SKVVNQEEVL LKLTEKALRI TEENEDDQQK  300
TGGQTESNLI GSGEKRKCSF DPETTFDPLX TCQNSKCPNS CIEWAFSDKT SRTNHETWMC  360
IYRDNDVVQN GQEIVGGILE KQLSFVHAEE REMQPSDLIQ MTQEKGSHVF NEGGEEAPGE  420
VTEQLPLDPG IYWDVIAQLP LDPACGNMDL NAKPFEELLN EEPATSVWDL AYPDM
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4zds_A6e-581552821128Protein ETHYLENE INSENSITIVE 3
4zds_B6e-581552821128Protein ETHYLENE INSENSITIVE 3
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtPutative transcription factor that may be involved in the ethylene response pathway. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011090514.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKJ0629895e-58KJ062989.1 Sesamum indicum clone TilSSR_34190 microsatellite Sesame_34190 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011090514.10.0LOW QUALITY PROTEIN: putative ETHYLENE INSENSITIVE 3-like 4 protein
SwissprotQ9LX161e-136EIL4_ARATH; Putative ETHYLENE INSENSITIVE 3-like 4 protein
TrEMBLA0A2G9IAH00.0A0A2G9IAH0_9LAMI; Uncharacterized protein
STRINGXP_009792280.11e-163(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA30423178
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10120.11e-137EIL family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Jeong HJ,Choi JY,Shin HY,Bae JM,Shin JS
    Seed-specific expression of seven Arabidopsis promoters.
    Gene, 2014. 553(1): p. 17-23
    [PMID:25261846]