PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011090449.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family ERF
Protein Properties Length: 377aa    MW: 40970.7 Da    PI: 5.1292
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011090449.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP268.81e-21178227255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+W+AeIrdp+    + +r++lg+f+taeeAa+a+++a+++++g
  XP_011090449.1 178 RYRGVRQRP-WGKWAAEIRDPY----KaARVWLGTFDTAEEAARAYDEAALRFRG 227
                     7********.**********76....35*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103225.633178235IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.9E-33178236IPR001471AP2/ERF domain
PfamPF008479.4E-15178227IPR001471AP2/ERF domain
SMARTSM003801.3E-37178241IPR001471AP2/ERF domain
SuperFamilySSF541713.14E-23178236IPR016177DNA-binding domain
CDDcd000185.10E-34178237No hitNo description
PRINTSPR003673.0E-12179190IPR001471AP2/ERF domain
PRINTSPR003673.0E-12201217IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0006970Biological Processresponse to osmotic stress
GO:0009749Biological Processresponse to glucose
GO:0009788Biological Processnegative regulation of abscisic acid-activated signaling pathway
GO:0010200Biological Processresponse to chitin
GO:0050832Biological Processdefense response to fungus
GO:0005730Cellular Componentnucleolus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 377 aa     Download sequence    Send to blast
MCVFKVANQR EDFYRGENGD EDEVFDGRNE LLESLVSPML SGMNREQEMS AMVSALAHVV  60
AGDVSEDAVE GVAAAGGSGA GGGSSSSACK RGRDELSSGG GDQQFSDSSV SRVCRGYSDH  120
FSIGNPSLGA SLLEAAGGSM IRTSIITSTE SAVYTYTPTY HQETSTESSG GAPRIGRRYR  180
GVRQRPWGKW AAEIRDPYKA ARVWLGTFDT AEEAARAYDE AALRFRGNKA KLNFPENVRL  240
VHHHSPSSSS VHDHHQQQQQ IQYYSDPSRM AAVSTSAEPI VHSQAQYNMN YSSGVMTLDD  300
IQRQAARDSS SLIDELMLYP SGFLESYPSP AAPFPMFFPA SQPPESGLRQ ERSQGSGGGA  360
DFSWRETSHD HTHLDDN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A2e-23176238366ATERF1
3gcc_A2e-23176238366ATERF1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00584DAPTransfer from AT5G64750Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011090449.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKJ0584453e-56KJ058445.1 Sesamum indicum clone TilSSR_29646 microsatellite Sesame_29646 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011090449.10.0ethylene-responsive transcription factor ABR1-like
TrEMBLA0A2G9H1S75e-86A0A2G9H1S7_9LAMI; Uncharacterized protein
STRINGMigut.H02460.1.p2e-85(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21241165
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64750.13e-19ERF family protein