PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_011090107.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
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Family | GeBP | ||||||||
Protein Properties | Length: 171aa MW: 19672.3 Da PI: 10.1555 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 40.7 | 6.5e-13 | 41 | 85 | 48 | 97 |
DUF573 48 kvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 ++s+ q+ +KirrLK+K++k+ + + s++++hd++++el++kiWg XP_011090107.1 41 DFSEAQIRDKIRRLKQKYHKQARS-----KSSIKTPHDREAYELARKIWG 85 799****************99998.....789*****************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04504 | 9.7E-11 | 41 | 85 | IPR007592 | Protein of unknown function DUF573 |
Sequence ? help Back to Top |
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Protein Sequence Length: 171 aa Download sequence Send to blast |
MNRRSASKVP SKPTRLFTQK DEIDLLNSLL NSSGNPICGG DFSEAQIRDK IRRLKQKYHK 60 QARSKSSIKT PHDREAYELA RKIWGPKKTR IPSPTTLDDA KKEGSESRVN WSSYPFLMRQ 120 VSWAFSGSYE VYKQGLEGLG EDVLKGFDEK WMELEKEEAA LEARRAQLLH N |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_011090107.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011090107.1 | 1e-125 | probable transcription factor At1g11510 | ||||
TrEMBL | A0A2G9G0U9 | 6e-58 | A0A2G9G0U9_9LAMI; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA13634 | 7 | 8 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G61730.1 | 1e-07 | DNA-binding storekeeper protein-related transcriptional regulator |