PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011089286.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family GATA
Protein Properties Length: 336aa    MW: 36681.6 Da    PI: 8.7843
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011089286.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA61.11.3e-19241274134
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                     C++C +tkTp+WR+gp g+ktLCnaCG++yr+ +
  XP_011089286.1 241 CTHCEVTKTPQWREGPLGPKTLCNACGVRYRSGR 274
                     *******************************987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM004012.9E-15235285IPR000679Zinc finger, GATA-type
PROSITE profilePS5011411.609235271IPR000679Zinc finger, GATA-type
Gene3DG3DSA:3.30.50.103.2E-14239272IPR013088Zinc finger, NHR/GATA-type
CDDcd002022.06E-16240287No hitNo description
SuperFamilySSF577161.43E-14240298No hitNo description
PfamPF003202.0E-17241274IPR000679Zinc finger, GATA-type
PROSITE patternPS003440241266IPR000679Zinc finger, GATA-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    Send to blast
MGVVEPGNCW DAVANGVAGD EEFENILSIL DFPMESLDGD GFVEDWDISK SQSLGPIPSN  60
VLFGPPMIPN GKIDTGPPNL LPGPVAPIAA APEHKLPSTY VEASGSHMLQ QNKFVDVQES  120
GFFQTQSPVS VLESGGSCSA GKNLPIKSHN AIPVRTRSKR VRHAGINPWL LVSPWFAATS  180
TSKRTSNARK HKEARKKLSQ PSVVVKSTRD SPEKVENSLQ VSDYGEPQNV SSHRPALAKK  240
CTHCEVTKTP QWREGPLGPK TLCNACGVRY RSGRLFPEYR PAASPTFVPS LHSNSHKKVI  300
EMRSKAKQPA TKLEEPPISP QPEFVPMSSY LFDYIH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1154159RTRSKR
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011089286.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020552412.10.0GATA transcription factor 11-like
TrEMBLA0A2G9HBY51e-179A0A2G9HBY5_9LAMI; Uncharacterized protein
STRINGMigut.D02232.1.p1e-105(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA31342149
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08010.21e-47GATA transcription factor 11