PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011089231.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family ERF
Protein Properties Length: 278aa    MW: 31052.7 Da    PI: 6.9731
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011089231.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.18.9e-182978255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    ++ GVr+++ +g+WvAeI+  +   ++ r +lg+f+taeeAa+a+++a+  l+g
  XP_011089231.1 29 KFVGVRQRP-SGKWVAEIKNTT---QKIRMWLGTFDTAEEAAQAYDEAACLLRG 78
                    799******.7******99932...36**********************99987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.21E-312985No hitNo description
PROSITE profilePS5103219.2692986IPR001471AP2/ERF domain
SMARTSM003804.0E-352992IPR001471AP2/ERF domain
PfamPF008475.6E-132978IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.9E-272986IPR001471AP2/ERF domain
SuperFamilySSF541715.49E-192986IPR016177DNA-binding domain
PRINTSPR003677.5E-83041IPR001471AP2/ERF domain
PRINTSPR003677.5E-85268IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000302Biological Processresponse to reactive oxygen species
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009723Biological Processresponse to ethylene
GO:0035865Biological Processcellular response to potassium ion
GO:0048528Biological Processpost-embryonic root development
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    Send to blast
MELHFHTTSA DNNHHTTCKS RTRGPNRNKF VGVRQRPSGK WVAEIKNTTQ KIRMWLGTFD  60
TAEEAAQAYD EAACLLRGSN TRTNFLNNVP CNPALSLKIR NLLNQKRGLK KATLPSQNVP  120
STTTKCANQE TSQKAISPSS SFESSSSSGS FCSNKIDGSP VSGLNPANFG DGYKPDLSCF  180
MGGYEMSSSY VNHCDEGFNY AMDFDKISLQ QDGIFVPKRA DEVMNDAQFP DFERMKVERQ  240
ISASLYAMNG INEYWDNIND PNDVFWDIPT LCQMFCPS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A2e-142085571Ethylene-responsive transcription factor ERF096
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00521DAPTransfer from AT5G19790Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011089231.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011089231.10.0ethylene-responsive transcription factor RAP2-11-like
TrEMBLA0A2Z7AGU61e-103A0A2Z7AGU6_9LAMI; Uncharacterized protein
STRINGMigut.D02583.1.p2e-95(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA20182261
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.11e-49related to AP2 11