PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_011088250.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
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Family | bZIP | ||||||||
Protein Properties | Length: 422aa MW: 45585.9 Da PI: 10.2856 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 41.5 | 3e-13 | 344 | 394 | 5 | 55 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 +r rr++kNRe+A rsR+RK+a++ eLe +v++L + N++L+k+ ee ++ XP_011088250.1 344 RRRRRMIKNRESAARSRARKQAYTLELEAEVAKLREMNQELRKKQEEFLEM 394 689****************************************98887665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 4.0E-12 | 340 | 405 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.864 | 342 | 391 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 7.7E-13 | 344 | 392 | No hit | No description |
SuperFamily | SSF57959 | 1.55E-9 | 344 | 393 | No hit | No description |
Pfam | PF00170 | 1.8E-11 | 344 | 394 | IPR004827 | Basic-leucine zipper domain |
PROSITE pattern | PS00036 | 0 | 347 | 362 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14707 | 4.14E-23 | 349 | 398 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 422 aa Download sequence Send to blast |
MGSYMNFKNF GDTVQQPDGS AGKPAGNFPL VRQSSIYSLT FDELQNTLGG SGKDFGSMNM 60 EDLLKSIWTA EESQAMVSST GGGDGSASGG NLQRQGSLTL PWTLSQKTVD EVWRDVLKET 120 IEAKDGSSGG QTNLGPRQPT LGEMTLEEFL FRAGVVREDN QPSGRPNGTG FYGGLPPSSG 180 NNSGLTIGFQ QPSRNNGVLG NPLAEQSNIV LNTPNLVNNI NGVRTSQQQP QQPHSQLQPL 240 FPKQTTVAFS SPTQLGSNAQ LSSPGTKGQV VGMMNTIVQG GAVVMSGLNN GAAVAGGSPG 300 NHLHSDAIVK TNTDTPSVSP SPFNFGESGR GRRSSSSLEK VVERRRRRMI KNRESAARSR 360 ARKQAYTLEL EAEVAKLREM NQELRKKQEE FLEMQKNQIL ETMNKPWGGK RRCLRRTLTG 420 PW |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Binds to the ABA-responsive element (ABRE). Mediates stress-responsive ABA signaling. {ECO:0000269|PubMed:11884679, ECO:0000269|PubMed:15361142}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_011088250.1 |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Up-regulated by drought, salt, abscisic acid (ABA). {ECO:0000269|PubMed:10636868, ECO:0000269|PubMed:16284313}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011088250.1 | 0.0 | bZIP transcription factor 23-like | ||||
Refseq | XP_011088251.1 | 0.0 | bZIP transcription factor 23-like | ||||
Refseq | XP_011088252.1 | 0.0 | bZIP transcription factor 23-like | ||||
Swissprot | Q9M7Q3 | 1e-103 | AI5L6_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 6 | ||||
TrEMBL | A0A2U9Q8N8 | 0.0 | A0A2U9Q8N8_SALMI; ABA-responsive element (ABRE)-binding transcription factor1 | ||||
STRING | XP_009791697.1 | 1e-171 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA776 | 24 | 97 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G34000.2 | 2e-87 | abscisic acid responsive elements-binding factor 3 |