PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_011087814.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
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Family | bZIP | ||||||||
Protein Properties | Length: 250aa MW: 27189 Da PI: 7.6393 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 47.8 | 3.2e-15 | 169 | 228 | 4 | 63 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 +++rr++kNRe+A rsR+RK+a++ eLe v Le+eN +L +e el+k+ +k +e+ XP_011087814.1 169 QQKQRRMIKNRESAARSRERKQAYTLELESLVTHLEEENARLLEEEAELNKKRYKQLMEN 228 689******************************************999999998877665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 3.8E-13 | 166 | 230 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 4.4E-14 | 168 | 228 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.323 | 168 | 220 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 2.69E-11 | 170 | 221 | No hit | No description |
CDD | cd14707 | 1.69E-20 | 170 | 217 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 6.4E-14 | 171 | 226 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 173 | 188 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 250 aa Download sequence Send to blast |
MASSKVMASR SPPNPDHPPH PSFPTPLNIL HPDQTRGFGA SMNIDDMLTN IYSHPDSFAL 60 HNAFMLRDGA GPGEPAMTLE DFLAKAGAVT EEDVCLPPTG VFGVETAMLS AAAAATGVPV 120 ACVQNGVASG RFGVDFPNGV LAVGGGAGGC GRGKRKVAVE EVPLDKATQQ KQRRMIKNRE 180 SAARSRERKQ AYTLELESLV THLEEENARL LEEEAELNKK RYKQLMENLI PVVEKRRPPR 240 ALRKIHSMEW |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Binds to the G-box motif (5'-CCACGTGG-3') of the rbcS-1A gene promoter. G-box and G-box-like motifs are cis-acting elements defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control. {ECO:0000269|PubMed:8146148}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_011087814.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | KJ076231 | 2e-56 | KJ076231.1 Sesamum indicum clone TilSSR_47432 microsatellite Sesame_47432 sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011087814.1 | 0.0 | G-box-binding factor 4 | ||||
Swissprot | P42777 | 3e-37 | GBF4_ARATH; G-box-binding factor 4 | ||||
TrEMBL | A0A2G9H7R3 | 2e-93 | A0A2G9H7R3_9LAMI; Uncharacterized protein | ||||
STRING | Migut.B00653.1.p | 2e-84 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA2771 | 24 | 52 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G44080.1 | 3e-25 | bZIP family protein |