PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011087740.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family bHLH
Protein Properties Length: 311aa    MW: 35129.5 Da    PI: 5.0876
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011087740.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.31.1e-12135186254
                     HHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-.STCHHHHHHHHHHHHHH CS
             HLH   2 rrahnerErrRRdriNsafeeLrellPk.askapskK.lsKaeiLekAveYIksL 54 
                     +  hn+ Er RR ++N ++  Lr+llP  +   +skK  s  +i+e++v+YI +L
  XP_011087740.1 135 KLDHNAKERIRRMKLNASYLALRSLLPDsR---RSKKrWSAPAIVERVVKYIPEL 186
                     678*************************66...88888**************988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474592.09E-12129198IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088813.205133186IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.99E-9134191No hitNo description
Gene3DG3DSA:4.10.280.102.8E-11135211IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.7E-9135187IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.6E-7139192IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    Send to blast
MPSTSPIADP LNDIESPEFL SPFDDSWPLY QEILRQTWAP ADRDETVNTE IHSNRMDHEA  60
ATMIMNSADV VDHVDEQQPI LDKGLELMKI RCNPKNSKTR RSRSCKLIRN NNERSTTAGM  120
EQSAEEGPSD VVAKKLDHNA KERIRRMKLN ASYLALRSLL PDSRRSKKRW SAPAIVERVV  180
KYIPELENEV EALRSKKDNI VQQSSTSKKK IASAEHQNLT VCVNKINQEE AVVQVCMGSR  240
EDDEDGEVVG FTNLLQAVED DEGICNIKSA STVDVCESRI CCHLHIQVNQ SSSEAEGYIE  300
ELKDKIISRL I
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011087740.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011087740.10.0transcription factor bHLH100
TrEMBLA0A4D9AND71e-64A0A4D9AND7_SALSN; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1545167
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71200.13e-30bHLH family protein