PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_011087716.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
|
||||||||
Family | bZIP | ||||||||
Protein Properties | Length: 370aa MW: 41395.9 Da PI: 8.8371 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 24.4 | 6.3e-08 | 240 | 286 | 17 | 63 |
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 17 ArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 A+rsR RK+++i+eLe+ v++L+ae ++ ele l+++ l +e+ XP_011087716.1 240 AQRSRVRKLQYIAELERNVQALQAEGSEVSAELEFLNQQNLILSMEN 286 89***********************************9998887776 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 5.2E-4 | 229 | 288 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14703 | 2.27E-16 | 231 | 279 | No hit | No description |
SuperFamily | SSF57959 | 6.19E-6 | 240 | 282 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 4.5E-8 | 240 | 282 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 370 aa Download sequence Send to blast |
MANSKGPSSI RSVLYNGKNS LLPPKSPFPS ISPSYAEYIP SSAIGPKTLP KPRDGNSHHQ 60 RTSSESFLIE EQPSWLDELL DEPETPVRRG GHRRSSSDSF AYIDSVNAGS MNYAAQDDNR 120 FKNMTPLSSW GSQDFDIYRD ARQSSFYADQ NPSIKTKHKP WDAPVAPPRG LPSPRGNTLV 180 QNVGSLGTSQ DADKNPSLST EKQDLVESVP QDPKGSTEKK DSCHVKSSET DTKRAKQQFA 240 QRSRVRKLQY IAELERNVQA LQAEGSEVSA ELEFLNQQNL ILSMENKALK QRLESLAQEQ 300 LIKYLEHEVL EREVGRLRAL FQQQQQPLQQ TSSGHRRANS RDLDQQFANL SLKPKEATAG 360 RDSVPGQLHM |
Cis-element ? help Back to Top | |
---|---|
Source | Link |
PlantRegMap | XP_011087716.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_011087712.1 | 0.0 | uncharacterized protein At4g06598 | ||||
Refseq | XP_011087714.1 | 0.0 | uncharacterized protein At4g06598 | ||||
Refseq | XP_011087715.1 | 0.0 | uncharacterized protein At4g06598 | ||||
Refseq | XP_011087716.1 | 0.0 | uncharacterized protein At4g06598 | ||||
Swissprot | Q8W3M7 | 7e-64 | Y4598_ARATH; Uncharacterized protein At4g06598 | ||||
TrEMBL | A0A2G9GBP7 | 0.0 | A0A2G9GBP7_9LAMI; Uncharacterized protein | ||||
STRING | cassava4.1_009724m | 1e-170 | (Manihot esculenta) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G58110.2 | 5e-99 | bZIP family protein |
Publications ? help Back to Top | |||
---|---|---|---|
|