PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011087712.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family bZIP
Protein Properties Length: 370aa    MW: 41395.9 Da    PI: 8.8371
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011087712.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_124.46.3e-082402861763
                     HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1  17 ArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                     A+rsR RK+++i+eLe+ v++L+ae ++   ele l+++   l +e+
  XP_011087712.1 240 AQRSRVRKLQYIAELERNVQALQAEGSEVSAELEFLNQQNLILSMEN 286
                     89***********************************9998887776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003385.2E-4229288IPR004827Basic-leucine zipper domain
CDDcd147032.27E-16231279No hitNo description
SuperFamilySSF579596.19E-6240282No hitNo description
Gene3DG3DSA:1.20.5.1704.5E-8240282No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 370 aa     Download sequence    Send to blast
MANSKGPSSI RSVLYNGKNS LLPPKSPFPS ISPSYAEYIP SSAIGPKTLP KPRDGNSHHQ  60
RTSSESFLIE EQPSWLDELL DEPETPVRRG GHRRSSSDSF AYIDSVNAGS MNYAAQDDNR  120
FKNMTPLSSW GSQDFDIYRD ARQSSFYADQ NPSIKTKHKP WDAPVAPPRG LPSPRGNTLV  180
QNVGSLGTSQ DADKNPSLST EKQDLVESVP QDPKGSTEKK DSCHVKSSET DTKRAKQQFA  240
QRSRVRKLQY IAELERNVQA LQAEGSEVSA ELEFLNQQNL ILSMENKALK QRLESLAQEQ  300
LIKYLEHEVL EREVGRLRAL FQQQQQPLQQ TSSGHRRANS RDLDQQFANL SLKPKEATAG  360
RDSVPGQLHM
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011087712.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011087712.10.0uncharacterized protein At4g06598
RefseqXP_011087714.10.0uncharacterized protein At4g06598
RefseqXP_011087715.10.0uncharacterized protein At4g06598
RefseqXP_011087716.10.0uncharacterized protein At4g06598
SwissprotQ8W3M77e-64Y4598_ARATH; Uncharacterized protein At4g06598
TrEMBLA0A2G9GBP70.0A0A2G9GBP7_9LAMI; Uncharacterized protein
STRINGcassava4.1_009724m1e-170(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA27651733
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G58110.25e-99bZIP family protein
Publications ? help Back to Top
  1. Kumekawa N,Hosouchi T,Tsuruoka H,Kotani H
    The size and sequence organization of the centromeric region of Arabidopsis thaliana chromosome 4.
    DNA Res., 2001. 8(6): p. 285-90
    [PMID:11853315]