PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011087063.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family WRKY
Protein Properties Length: 721aa    MW: 78925.4 Da    PI: 9.4197
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011087063.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY901.9e-28265323259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     +Dg++WrKYGqK  k +++pr+YYrCt + +Cpv+k+v+r+ +d +++++tYeg+H+h+
  XP_011087063.1 265 NDGCQWRKYGQKIAKRNPCPRAYYRCTVSsSCPVRKQVQRCVDDMSILITTYEGTHDHP 323
                     8**************************999****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.5E-30249325IPR003657WRKY domain
SuperFamilySSF1182904.97E-26257325IPR003657WRKY domain
PROSITE profilePS5081127.301259325IPR003657WRKY domain
SMARTSM007741.0E-33264324IPR003657WRKY domain
PfamPF031064.7E-25265323IPR003657WRKY domain
SuperFamilySSF533831.3E-10479618IPR015424Pyridoxal phosphate-dependent transferase
Gene3DG3DSA:3.90.1150.102.7E-6549616IPR015422Pyridoxal phosphate-dependent transferase, major region, subdomain 2
SuperFamilySSF559046.02E-29575718IPR008286Orn/Lys/Arg decarboxylase, C-terminal
Gene3DG3DSA:3.90.100.107.6E-26617718IPR008286Orn/Lys/Arg decarboxylase, C-terminal
PfamPF037111.2E-8639697IPR008286Orn/Lys/Arg decarboxylase, C-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0003824Molecular Functioncatalytic activity
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 721 aa     Download sequence    Send to blast
MLQQIAAPKQ ARSSRNCRKQ QAAGKVQKQQ CSRQFMLLPE KETFHLPPAA RFGRKKWLKI  60
GQQQQQNDAK MNRNCSKVQS MQMAANCSNF SPKTAAKTAV FLFCNSSGGF PAGKTTSKPK  120
TVREENQRLK STLSQMIKDY HSLKMHFNHI IQDDHHHQPK KSTDPMAASD DESEFVSLSL  180
GRPFSGDSKR EKMIKKESSN YRHHHGLELG LDCKSKEEGD NDNIRASQKS PKHHSTSGDD  240
VFLQHNPSKK PRVSVRAVCN TQTLNDGCQW RKYGQKIAKR NPCPRAYYRC TVSSSCPVRK  300
QVQRCVDDMS ILITTYEGTH DHPLPPSATT IAAATSAAAA TLSCSSSTSP PCHSVSATPS  360
TSPNLLGFNF PRAASQSHPT IVLDLTSPNH LTKFSASTLF PAAHSTPTSL NFSSSSAENV  420
SSSPYYQRNL IFDSNMRASE KHDQKMFDAI KCDPSFRSAL AAAITSVVGT NVEGKNSGLD  480
FHLSFSQPSN IDASTSPSWH FLASMDAARH QLSTDSTAFN DVVKLANVAK ILIRKIPGIS  540
VLDLSAFPGF SNMDPLRVTI GVWQLGLSGF QVNEILDNDL GIIPELVSTN SMTLAFSQGT  600
TGEHVQRLVS GLKHLSEKFS AVNCGNAVTG KARPYDVPLM SLNPREAFFA SKTRMKFKDC  660
SGEVCGESLC PYPPGIPVLV PGEVITEKAL DYLQQIKGHG GYIVGAADPQ LDYIVVCKTS  720
H
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A9e-21256326275WRKY transcription factor 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011087063.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2G9I6G41e-119A0A2G9I6G4_9LAMI; Uncharacterized protein
STRINGMigut.L01332.1.p1e-108(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA19452464
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15130.13e-50WRKY DNA-binding protein 72