PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011085852.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family ERF
Protein Properties Length: 345aa    MW: 38675 Da    PI: 4.278
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011085852.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.34.4e-193887255
             AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    ++ GVr+++ +grWvAeI+d      ++ r++lg+f+taeeAa+a+++a+  l+g
  XP_011085852.1 38 RFVGVRQRP-SGRWVAEIKDtI----QKIRVWLGTFDTAEEAARAYDEAACLLRG 87
                    789******.7*********33....35**********************99998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000183.12E-323794No hitNo description
SMARTSM003808.4E-3638101IPR001471AP2/ERF domain
PfamPF008477.9E-143887IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.3E-273894IPR001471AP2/ERF domain
PROSITE profilePS5103219.5593895IPR001471AP2/ERF domain
SuperFamilySSF541711.96E-193896IPR016177DNA-binding domain
PRINTSPR003674.5E-83950IPR001471AP2/ERF domain
PRINTSPR003674.5E-86177IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 345 aa     Download sequence    Send to blast
MARKRKAVEE LKISPGEQTA DEMVKAAALG GITRARKRFV GVRQRPSGRW VAEIKDTIQK  60
IRVWLGTFDT AEEAARAYDE AACLLRGANT RTNFWPSSSS TVLPSKITNL LLSRLKARND  120
NTNSSSNSSS SSVSSSIPCT DEKQRMDYAD REEPELLESN FPDFLHDPDE DFSLENNSRL  180
INDFSSFDPG MPQTESDMSN DFPGIVELEN EAEEENCASS EVVDLQFVDD IIGSSIEYSP  240
FEIAEEISGG MEDEPLTLTE AMKRMNYERK FSASLYAFNG ISECLKLKLK SPVDRSDQVS  300
RLRNAINEKV EQKEKMENED DNCLNLDGEL SLWSSIDLPP ICFVS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A2e-143194771Ethylene-responsive transcription factor ERF096
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011085852.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011085852.10.0ethylene-responsive transcription factor 3-like
TrEMBLA0A2Z7BG351e-124A0A2Z7BG35_9LAMI; Dehydration-responsive element-binding protein 2E-like
STRINGAES747749e-98(Medicago truncatula)
STRINGcassava4.1_008867m5e-98(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA43102037
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.12e-23related to AP2 11