PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011085351.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family ERF
Protein Properties Length: 367aa    MW: 40473.9 Da    PI: 5.4431
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011085351.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.31.1e-19150200256
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                      y+GVr+++ +g+WvAeIr p++   r+r +lg+f+taeeAa a+++ + kl+ge
  XP_011085351.1 150 LYRGVRQRH-WGKWVAEIRLPRN---RTRLWLGTFDTAEEAALAYDREAFKLRGE 200
                     59******9.**********955...5**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.75E-34149209No hitNo description
PROSITE profilePS5103223.103150207IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.3E-32150208IPR001471AP2/ERF domain
SMARTSM003806.4E-39150213IPR001471AP2/ERF domain
SuperFamilySSF541714.9E-23150208IPR016177DNA-binding domain
PfamPF008472.6E-13151200IPR001471AP2/ERF domain
PRINTSPR003673.6E-11151162IPR001471AP2/ERF domain
PRINTSPR003673.6E-11173189IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009651Biological Processresponse to salt stress
GO:0010200Biological Processresponse to chitin
GO:2000070Biological Processregulation of response to water deprivation
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 367 aa     Download sequence    Send to blast
MSNRPLKKVK SPERNQDNPF NSSSLPQQPA PQPPMAFPSP YTGPVFPFSL ENPSSSAPLL  60
RPPPHQNQQQ MISFAPPYPN QHMNFAFPPY FAGEAASSPP SQLQQQQLLQ YWSDALNLSP  120
RGRMMMINKL GQSGKPWFRP SIPPLSATKL YRGVRQRHWG KWVAEIRLPR NRTRLWLGTF  180
DTAEEAALAY DREAFKLRGE NARLNFPEVF IGKDKEAKAS SPSMSQDNIE SSAGPVPKPP  240
ATGESVNLPG SDKNPDANLG FEASEATETD QVQGNVDSSG GGEGASPSSE LVWGDMSEAW  300
FNAIPAGWGP GSPVWDDLDA NNNLLLPPNL PFNQQDSQHD SPSQKQNDNC SPSSSSYGRP  360
FFWKDQD
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A7e-20149207160ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00458DAPTransfer from AT4G28140Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011085351.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011085351.20.0ethylene-responsive transcription factor ERF054-like, partial
TrEMBLA0A022QFX51e-121A0A022QFX5_ERYGU; Uncharacterized protein (Fragment)
STRINGMigut.H01065.1.p1e-122(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA47182136
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G20880.16e-56ERF family protein