PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011084866.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family ERF
Protein Properties Length: 359aa    MW: 40408.4 Da    PI: 6.5831
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011084866.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.63e-1882133156
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkklege 56 
                     + y+GVr++  +g+Wv+eIr+p     +   r +lg+f ta+eAa a+++a+++++g+
  XP_011084866.1  82 CNYRGVRQRT-WGKWVSEIREP-----HrgSRLWLGTFKTANEAALAYDEAARAMYGH 133
                     56*****999.**********6.....337*************************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.35E-3082142No hitNo description
PfamPF008471.8E-1282133IPR001471AP2/ERF domain
SMARTSM003803.1E-3483146IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.105.5E-3283141IPR001471AP2/ERF domain
SuperFamilySSF541713.66E-2183141IPR016177DNA-binding domain
PROSITE profilePS5103221.35183140IPR001471AP2/ERF domain
PRINTSPR003675.1E-108495IPR001471AP2/ERF domain
PRINTSPR003675.1E-10106122IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009737Biological Processresponse to abscisic acid
GO:0010286Biological Processheat acclimation
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 359 aa     Download sequence    Send to blast
MVCYRDQASS MVSQTMDFNR KGKSRSRRDG TRCVAETIAK WKEYNIKFDS LGYEAKPVRK  60
APAKGSKKGC MKGKGGPENA SCNYRGVRQR TWGKWVSEIR EPHRGSRLWL GTFKTANEAA  120
LAYDEAARAM YGHCARLNFP DHGLPIEFAK DCPSLPTTST SHSTNSEMCC NDNKLKAYDS  180
KAKQEDGEKI ADNWHQAGGT PMTTSKGKIK EEAAEHELKK ETLREESREE SMDTEAVKFF  240
MIEKPDYLRC RGVNLDNFPA DDMFNVDEVI AALDPAPDRE PRPLTGTGLH VAQETKVDHR  300
DLSCQLQHPN EKLLGDLPHV EATIGFDHGI DFLRPGRPED YNLSFSELSL ELDPDQMVV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A2e-1783140260ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00302DAPTransfer from AT2G40340Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011084866.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011084866.10.0dehydration-responsive element-binding protein 2C-like
RefseqXP_020550945.10.0dehydration-responsive element-binding protein 2C-like
TrEMBLA0A2G9G1C74e-85A0A2G9G1C7_9LAMI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA37012445
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G05410.21e-33DRE-binding protein 2A