PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011084590.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family bZIP
Protein Properties Length: 328aa    MW: 36641.2 Da    PI: 9.6987
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011084590.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.24.7e-104184245
                    XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1  2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45
                    ++ k  rr+++NReAAr+sR+RKka++++Le    +L++  ++L
  XP_011084590.1 41 RDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRMKLTQLEQEL 84
                    567899*************************9888888777655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.4E-83787No hitNo description
SMARTSM003383.5E-840103IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.4614286IPR004827Basic-leucine zipper domain
PfamPF001703.5E-74385IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.75E-74487No hitNo description
PROSITE patternPS0003604762IPR004827Basic-leucine zipper domain
PfamPF141445.1E-30127201IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 328 aa     Download sequence    Send to blast
MADASPRTDT STDADTEDKN LRFKNNQLQT IATSDGSDKS RDQKTLRRLA QNREAARKSR  60
LRKKAYVQQL ESSRMKLTQL EQELQRARQQ GIFVSSSGDQ SQSASGNGAL AFDVEYARWL  120
EEHNRRINEL RGAVNSHAGD GELRIIVEGI VAHWDDIFRI KGEAAKADVF HILSGMWKTP  180
AERCFLWLGG FRSSELLKLL ISQLEPLTEQ QVLAINNLQQ SSQQAEDALS QGMEALQQSL  240
AETLAGSLSS SGSSGNVANY MGQMAMAMGK LGTLEGFIRQ ADNLRQQTLQ QMHRILTTRQ  300
SARALLAISD YFSRLRALSS LWLARPRE
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011084590.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011084590.10.0transcription factor TGA2.3-like
SwissprotQ415580.0HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment)
TrEMBLA0A068UNV80.0A0A068UNV8_COFCA; Uncharacterized protein
STRINGMigut.F00128.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8202385
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12250.21e-144TGACG motif-binding factor 6