PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011083531.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family C2H2
Protein Properties Length: 399aa    MW: 43781.7 Da    PI: 10.2588
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011083531.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.79e-05170192223
                     EETTTTEEESSHHHHHHHHHH.T CS
         zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                      C+ Cg++F+  ++L++H+ + H
  XP_011083531.1 170 ACSECGEVFPKIESLEHHQAVrH 192
                     6******************9888 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE patternPS000280169192IPR007087Zinc finger, C2H2
PROSITE profilePS501579.141169197IPR007087Zinc finger, C2H2
SuperFamilySSF563991.92E-14194348No hitNo description
Gene3DG3DSA:3.90.228.101.7E-5196347IPR012317Poly(ADP-ribose) polymerase, catalytic domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003950Molecular FunctionNAD+ ADP-ribosyltransferase activity
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 399 aa     Download sequence    Send to blast
MAVLSFTPEP KKQAYSNPSK NKKKQRAKHK QPSSWDQIKN LLTCKQIQDS KIHDPSRNPN  60
NLYSSCTSIC TFRDVVHGNT RVVHRADNSP DTDATSLGQE TRLLPKKTTT TTSLGSSSSR  120
SINSASLRSS AGAASYTGRG MQLRKFSGCY ECHAIVDPTR YPLPRTTVCA CSECGEVFPK  180
IESLEHHQAV RHAVSELGAE DSSRNIVEII FKSSWLKKDN PICKIERILK VHNTQRTIQR  240
FEDYRDAVKI RATNVPKRNA RCAADGNELL RFHSATLTCS LGDRGSSSLC GSIPACGVCT  300
IIRHGFQGNK INGIRTTASS GRAHDCLGRS GTRRAMLVCR VIAGRVKCSS GDEDGAASPA  360
GGTTRLRRRL RRDILEFRGV VRFQCKGDSA LLCGDLQSA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1364370RLRRRLR
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011083531.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC1825724e-55AC182572.2 Erythranthe guttata clone MGBa-75A14, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011083531.20.0LOW QUALITY PROTEIN: uncharacterized protein LOC105166030
TrEMBLA0A2G9HCT30.0A0A2G9HCT3_9LAMI; Uncharacterized protein
STRINGMigut.C00823.1.p1e-180(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA51952334
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75710.11e-140C2H2-like zinc finger protein