PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011083056.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family G2-like
Protein Properties Length: 480aa    MW: 52372.9 Da    PI: 5.7047
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011083056.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like108.14.8e-34263317155
         G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                     k+r+rWtpeLHe+Fveav++LGGse+AtPk +l+lmkv+gLt++hvkSHLQkYR+
  XP_011083056.1 263 KQRMRWTPELHEAFVEAVNKLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYRT 317
                     79****************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129413.829260320IPR017930Myb domain
SuperFamilySSF466895.91E-18261317IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.602.2E-31262319IPR009057Homeodomain-like
TIGRFAMsTIGR015572.7E-25263317IPR006447Myb domain, plants
PfamPF002492.9E-10265316IPR001005SANT/Myb domain
PfamPF143798.2E-26348395IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 480 aa     Download sequence    Send to blast
METKPALSIQ RPGGRQLNNC GASGALSSSL PVHLHPRDER YPDFSDTQQG FLERGVMQHP  60
VPNVAPLSSN SGVVGHIFSS SSGISNDLHF SSSQQQEKHP RQPPFISQSA NSGSSVLVPH  120
SVDSGVLQST ASSHYNKDHN ESWCTDALPD FLDFPVSGAV QNSQLDGSNI GAVAIPSEDP  180
NRPNDWQDWA DQLITDNDAL TDWNELLADT SVAAPDVKLL HQMSRQSTSI SVQPHVSQQL  240
PATPGETCNA AVQSPSTSSA PAKQRMRWTP ELHEAFVEAV NKLGGSERAT PKGVLKLMKV  300
EGLTIYHVKS HLQKYRTARY KPETMEGSSE RKSASIEELS SLDLKTGIEI TEALRLQMEV  360
QKRLHEQLEI QRNLQLRIEE QGRYLQMMFE KQCKSGVDLL KGASSSAEET DAIQNSRARD  420
NSGVEADNSS QGGDPANTAT GSRENSQMME QQQNIPGSEI PGNPNGKVES PPPKRAKLHE
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A4e-32262321160Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B4e-32262321160Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A4e-32262321160Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C4e-32262321160Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D4e-32262321160Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F4e-32262321160Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H4e-32262321160Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J4e-32262321160Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011083056.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011083055.10.0protein PHOSPHATE STARVATION RESPONSE 1
RefseqXP_011083057.10.0protein PHOSPHATE STARVATION RESPONSE 1
RefseqXP_020550432.10.0protein PHOSPHATE STARVATION RESPONSE 1
TrEMBLA0A022S2540.0A0A022S254_ERYGU; Uncharacterized protein
STRINGMigut.D00466.1.p0.0(Erythranthe guttata)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28610.16e-98phosphate starvation response 1