PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011082881.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family G2-like
Protein Properties Length: 343aa    MW: 36693.2 Da    PI: 6.6428
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011082881.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like102.42.9e-3272126155
         G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                     +prlrWtpeLHe+Fv+av++LGG++kAtPk+il+lm+v+gLtl+h+kSHLQk+Rl
  XP_011082881.1  72 RPRLRWTPELHEQFVKAVNELGGANKATPKAILNLMGVEGLTLYHLKSHLQKFRL 126
                     59****************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129411.06769129IPR017930Myb domain
SuperFamilySSF466892.33E-1670126IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.0E-2971126IPR009057Homeodomain-like
TIGRFAMsTIGR015575.4E-2373127IPR006447Myb domain, plants
PfamPF002491.2E-974124IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 343 aa     Download sequence    Send to blast
MTTKRKEPDS WWWAGGGGGG GGGEESMFGG VVVENQFHQG GVTAAVGGGY QIQTGKMVES  60
YDTDVYQASY PRPRLRWTPE LHEQFVKAVN ELGGANKATP KAILNLMGVE GLTLYHLKSH  120
LQKFRLGKTA RRLWRREFAP ADYRRRKDER AAAIGLEGQG NSSSSSPFDM NGIKALGSDT  180
YGNLHLVEKP HAAKKKQGVA ETISGIKLKQ QAGTSATAAV KLEEGGLAAA RPALLPLFPP  240
IPACGIDYPP EWSEFLEGGW KKPVASRPMD NTSMDDYLNS LGYSSEFALT KSPESGRAGM  300
GFGSFFDDVA SFSKVEDHDI AVDSGAVAVE AGELSAGVGS DFA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A1e-2172128258Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B1e-2172128258Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A1e-2172128157Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B1e-2172128157Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C1e-2172128157Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D1e-2172128157Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A1e-2172128258Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C1e-2172128258Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D1e-2172128258Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F1e-2172128258Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H1e-2172128258Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J1e-2172128258Protein PHOSPHATE STARVATION RESPONSE 1
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011082881.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011082881.10.0myb family transcription factor APL-like isoform X1
TrEMBLA0A2G9HGM71e-112A0A2G9HGM7_9LAMI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1791044
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G79430.21e-27G2-like family protein