PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011082156.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family BES1
Protein Properties Length: 571aa    MW: 64516.9 Da    PI: 7.7447
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011082156.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF8221394.5e-43662223142
          DUF822   3 sgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyr...............kgskpl.eeaea 81 
                     + rk+++kE+E++k+RER+RRai+++++aGLR++Gn++lp+raD+n+V++AL+reAGw+ve+DGttyr               ++ +++  +a  
  XP_011082156.1  66 KSRKEREKEKERTKLRERHRRAITSRMLAGLRQYGNFPLPARADMNDVIAALAREAGWTVEADGTTYRhsspapaaqapmaqfNSAQQNnINAPN 160
                     789*****************************************************************544444333333332222222233333 PP

          DUF822  82 agssasaspesslq.sslkssalaspvesysaspksssfpspssldsislasaasllpvlsv 142
                     +g+   +s+es+l  ss+k+++++s v+ + + ++ ++ +sp+slds+ ++ +a+l +++s 
  XP_011082156.1 161 MGAHPVRSVESPLYsSSVKNCSMRSSVDCQPSALRVDENLSPASLDSVAAERDAKLDKYSSA 222
                     44444466777766677888888888888888888888888888888877766666665555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056875.2E-4666226IPR008540BES1/BZR1 plant transcription factor, N-terminal
SuperFamilySSF514453.1E-112250542IPR017853Glycoside hydrolase superfamily
Gene3DG3DSA:3.20.20.802.3E-124252535IPR013781Glycoside hydrolase, catalytic domain
PfamPF013733.6E-61274543IPR001554Glycoside hydrolase, family 14
PRINTSPR007505.1E-31289303IPR001554Glycoside hydrolase, family 14
PRINTSPR007505.1E-31310328IPR001554Glycoside hydrolase, family 14
PRINTSPR007505.1E-31332353IPR001554Glycoside hydrolase, family 14
PRINTSPR007505.1E-31425447IPR001554Glycoside hydrolase, family 14
PRINTSPR007505.1E-31498517IPR001554Glycoside hydrolase, family 14
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000272Biological Processpolysaccharide catabolic process
GO:0048831Biological Processregulation of shoot system development
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0016161Molecular Functionbeta-amylase activity
Sequence ? help Back to Top
Protein Sequence    Length: 571 aa     Download sequence    Send to blast
MNTNVNTMNH SFAAGAQDLE PQQSPPPPTT TSHPYHPQPQ PQRRPRGFAA TNSNNNTTIS  60
SSTPTKSRKE REKEKERTKL RERHRRAITS RMLAGLRQYG NFPLPARADM NDVIAALARE  120
AGWTVEADGT TYRHSSPAPA AQAPMAQFNS AQQNNINAPN MGAHPVRSVE SPLYSSSVKN  180
CSMRSSVDCQ PSALRVDENL SPASLDSVAA ERDAKLDKYS SATAINSPEC LEARQLVQDV  240
HCREHGNDLS GTSYIPVYVR LATGLINNFC QLMDPEGIKE ELQHLKALHV DGIVVDCWWG  300
IVEAWAPKKY EWAGYREMFN IIREFRMKLQ VIMAFHEYGG HDSGGIFISL PQWVLEIGKS  360
NQDIFFTDRE GRRNTECLSW GIDKERVLRG RTGIEVYFDF MRSFRTEFND LFTEGLISAV  420
EIGLGASGEL KYPAFPERMG WRYPGIGEFQ CYDKYLLQNL EKAAKLRGHS FWGRGPDNAG  480
YYNSKPHETG FFCERGDFDS YYGRFFLWWY TKVLIDHADN VLSLASLAFE DIQIVVNRFI  540
GGTRHQAMLR NSLQAIITLL TGMAILRCLK C
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1bfn_A7e-9425352910285BETA-AMYLASE
1q6c_A7e-9425352910285beta-amylase
1v3i_A7e-9425352910285Beta-amylase
1wdp_A7e-9425352910285Beta-amylase
1wdr_A7e-9425352910285Beta-amylase
1wds_A7e-9425352910285Beta-amylase
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00543DAPTransfer from AT5G45300Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011082156.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011082155.10.0beta-amylase 8
SwissprotQ9FH800.0BAM8_ARATH; Beta-amylase 8
TrEMBLA0A4D9BKE80.0A0A4D9BKE8_SALSN; Uncharacterized protein
STRINGMigut.A00486.1.p0.0(Erythranthe guttata)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G45300.10.0beta-amylase 2
Publications ? help Back to Top
  1. Soyk S, et al.
    The Enzyme-Like Domain of Arabidopsis Nuclear β-Amylases Is Critical for DNA Sequence Recognition and Transcriptional Activation.
    Plant Cell, 2014. 26(4): p. 1746-1763
    [PMID:24748042]