PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_011081566.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
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Family | ERF | ||||||||
Protein Properties | Length: 207aa MW: 23104.2 Da PI: 9.2056 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 58.2 | 2e-18 | 7 | 56 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 +++GVr++ +g+Wv+eIr+p kr++lg+f tae Aa+a+++a+ + g XP_011081566.1 7 KFRGVRQRQ-WGSWVSEIRHP-----LlkKRIWLGTFETAEAAARAYDEAAILMSG 56 79****999.**********8.....335*********************987765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:3.30.730.10 | 9.4E-33 | 7 | 66 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 1.49E-20 | 7 | 66 | No hit | No description |
PROSITE profile | PS51032 | 21.891 | 7 | 64 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 2.22E-20 | 7 | 66 | IPR016177 | DNA-binding domain |
SMART | SM00380 | 4.4E-40 | 7 | 70 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 5.3E-11 | 7 | 54 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 2.6E-10 | 8 | 19 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 2.6E-10 | 30 | 46 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 207 aa Download sequence Send to blast |
MVQSKIKFRG VRQRQWGSWV SEIRHPLLKK RIWLGTFETA EAAARAYDEA AILMSGQNAK 60 TNFPESNPSS TTADHDSPLS WSPSAALSSV SDILGAKLKK CCKNNPTPSI TCLRLDVNDN 120 SKIGVWQKRA GRHSGSQWVM KVELMKKKKK TKLPTHDDDS SNIYHISSQS SSSEIGDPMD 180 EENKVAMQMV EELLDWNAAS LANQLME |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1gcc_A | 7e-16 | 8 | 64 | 3 | 60 | ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1 |
5wx9_A | 9e-16 | 7 | 64 | 14 | 72 | Ethylene-responsive transcription factor ERF096 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Promotes cuticle formation by inducing the expression of enzymes involved in wax biosynthesis (PubMed:15070782, PubMed:15319479). Confers drought resistance (PubMed:15319479). Acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250, ECO:0000269|PubMed:15070782, ECO:0000269|PubMed:15319479}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_011081566.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | KJ034572 | 1e-56 | KJ034572.1 Sesamum indicum clone TilSSR_5773 microsatellite sesame_5773 sequence. | |||
GenBank | KJ076557 | 1e-56 | KJ076557.1 Sesamum indicum clone TilSSR_47758 microsatellite Sesame_47758 sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011081566.1 | 1e-153 | ethylene-responsive transcription factor WIN1-like | ||||
Swissprot | Q9XI33 | 3e-61 | WIN1_ARATH; Ethylene-responsive transcription factor WIN1 | ||||
TrEMBL | A0A4D8ZSK5 | 1e-77 | A0A4D8ZSK5_SALSN; Uncharacterized protein | ||||
STRING | PGSC0003DMT400077702 | 3e-71 | (Solanum tuberosum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA1352 | 24 | 76 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G15360.1 | 5e-51 | ERF family protein |