PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011081306.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family ERF
Protein Properties Length: 235aa    MW: 25774.7 Da    PI: 6.5988
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011081306.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.96.1e-1965114255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                      ++GVr+++ +g+Wv+eIr+p++   + r++lg+f tae+Aa+a++aa+ +++g
  XP_011081306.1  65 TFRGVRRRS-WGKWVSEIREPRK---KSRIWLGTFATAEMAARAHDAAAIAIKG 114
                     59****887.**********843...6**********************99887 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541712.42E-2165123IPR016177DNA-binding domain
SMARTSM003808.7E-3765128IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.1E-3165123IPR001471AP2/ERF domain
PROSITE profilePS5103223.0965122IPR001471AP2/ERF domain
PfamPF008477.5E-1366114IPR001471AP2/ERF domain
CDDcd000181.78E-2066124No hitNo description
PRINTSPR003672.0E-106677IPR001471AP2/ERF domain
PRINTSPR003672.0E-1088104IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 235 aa     Download sequence    Send to blast
MDQQFTIFDC MHDESTAAAT ITTTTTSSPY FFSRAEPSTT DHNKMKRINK ISTRINHGER  60
NDHPTFRGVR RRSWGKWVSE IREPRKKSRI WLGTFATAEM AARAHDAAAI AIKGRSAFLN  120
FPELAQQLPR PASNSPKDVQ AAATKAAELM VSAAEHGSDR NAHMSPISST CSADNDNIDD  180
AFLGLPDLFL GISGHYQLDG WFCTAAAGAP LLQVAGGEAF HGEFSPEDFV PWDCS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A2e-18621221172Ethylene-responsive transcription factor ERF096
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011081306.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKJ0519262e-56KJ051926.1 Sesamum indicum clone TilSSR_23127 microsatellite Sesame_23127 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011081306.21e-176ethylene-responsive transcription factor ERF039-like
TrEMBLA0A103XRF22e-52A0A103XRF2_CYNCS; AP2/ERF domain-containing protein
STRINGcassava4.1_026245m9e-49(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21224225
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32800.17e-35ERF family protein