PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011081002.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family MYB
Protein Properties Length: 602aa    MW: 66260 Da    PI: 7.4717
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011081002.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding56.66.1e-1859102448
                      S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      WT eEd+ll ++v+++ g++Wk+Ia++m  gRt+ qc +rwqk+l
   XP_011081002.1  59 WTNEEDKLLTEVVQRFNGRNWKKIAECMS-GRTDVQCLHRWQKVL 102
                      *****************************.************986 PP
2Myb_DNA-binding60.14.9e-19108154148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      + +WT+eEd+ ++++v ++G++ W+tIa++++ gR +kqc++rw+++l
   XP_011081002.1 108 KSPWTKEEDDCIIELVGKYGSKKWSTIAKYLP-GRIGKQCRERWHNHL 154
                      679*****************************.*************97 PP
3Myb_DNA-binding53.84.3e-17160202145
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 
                      +++WT+eE+ +l+++++ lG++ W+ Iar ++ gRt++ +k++w+
   XP_011081002.1 160 KDAWTEEEEAILAHYHQVLGNK-WAEIARFLP-GRTDNAIKNHWN 202
                      679*******************.*********.***********8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129411.88749102IPR017930Myb domain
SMARTSM007171.3E-1355104IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.602.2E-2358118IPR009057Homeodomain-like
SuperFamilySSF466891.38E-1558112IPR009057Homeodomain-like
PfamPF002492.8E-1559102IPR001005SANT/Myb domain
CDDcd001671.17E-1359102No hitNo description
PROSITE profilePS5129430.915103158IPR017930Myb domain
SuperFamilySSF466891.27E-31106201IPR009057Homeodomain-like
SMARTSM007174.0E-17107156IPR001005SANT/Myb domain
PfamPF002496.9E-18108154IPR001005SANT/Myb domain
CDDcd001674.54E-16110154No hitNo description
Gene3DG3DSA:1.10.10.605.6E-27119160IPR009057Homeodomain-like
PROSITE profilePS5129418.283159209IPR017930Myb domain
SMARTSM007171.5E-15159207IPR001005SANT/Myb domain
PfamPF002497.8E-15160202IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.601.4E-21161207IPR009057Homeodomain-like
CDDcd001674.82E-12162202No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 602 aa     Download sequence    Send to blast
MVQVKKEACT PESTKEVRLA SSSFSESSCD TITPISSSDS GFSVYRRSGP ARRSSQAGWT  60
NEEDKLLTEV VQRFNGRNWK KIAECMSGRT DVQCLHRWQK VLNPALVKSP WTKEEDDCII  120
ELVGKYGSKK WSTIAKYLPG RIGKQCRERW HNHLDPAIKK DAWTEEEEAI LAHYHQVLGN  180
KWAEIARFLP GRTDNAIKNH WNCSVKKRPD LNLPRFSALK VQGSTSPDTC NDEEKQGTSC  240
RITDTLGETR NFGQKPAPEK TDGACSTNLV LGNANFPGDG SETKPASLKI CRSPEGERNL  300
IEPLDGDQFG QFSSITSDSS GELLTANADK TSSVNPLSTD SLNYTMDAHY HTRKDHADPD  360
VRPIICARMF DSPKRPRYSP CVTDDRSDCS PVDTFLSLSL CGSSDESQKA EKRSRVCKTP  420
PLVDQKGCGF LCYEPPQLTD LDAPNSSRST GIGKDIERTG LELFHSYPGN LSLSLSSNDG  480
SPESLLKNSA MSYRNTPSII RRKTITEPAS GSYSGSLSNS MCFISCASTN KGANGSNLVS  540
EKGCLHCKDS TSGTSVSGQA LERRLEYAFD LEWDSTTARR CTPGSTTPSS ELKFDAKLML  600
TP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1h88_C9e-67592089158MYB PROTO-ONCOGENE PROTEIN
1h89_C9e-67592089158MYB PROTO-ONCOGENE PROTEIN
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011081002.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020550693.10.0uncharacterized protein LOC105164125
TrEMBLA0A2G9HZC70.0A0A2G9HZC7_9LAMI; Transcription factor, Myb superfamily
STRINGMigut.A00800.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA103932025
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32730.18e-82Homeodomain-like protein