PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011080441.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family bHLH
Protein Properties Length: 278aa    MW: 30984.6 Da    PI: 6.5118
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011080441.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH25.23e-08161208455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h+ +Er RR +iN+++  L++++P +     k +  a +L + ++Y++sLq
  XP_011080441.1 161 SHSLAERVRRGKINERLRCLQDIVPGC----YKSMGMAVMLDQIINYVQSLQ 208
                     8*************************8....366999*************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000833.49E-10155212No hitNo description
SuperFamilySSF474593.93E-16155225IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.0E-15157218IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.034157207IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.8E-5161208IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.5E-8163213IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    Send to blast
MADQYFLQNI KQSFSLADID PNIEFMNHFP GLNPGHQDTS DLNFHSLMGF PHDSINFHQL  60
PEFPGNLENF HGLFFLDDNT VIPPVPVPTI SNDNNHQDRK RKSTDISTPE SSSANSFSSD  120
KGIRKTNAAG RGKKVKSNEE KDDMPREVIH VRAKRGQATD SHSLAERVRR GKINERLRCL  180
QDIVPGCYKS MGMAVMLDQI INYVQSLQNQ VEFLSMKLTA ASTFYDFNTD ADGIDTLQRA  240
KASEALEVQN AASQGIPSAQ SAALGLNFGY FPQLPHSK
Functional Description ? help Back to Top
Source Description
UniProtPositive regulator of brassinosteroid signaling. {ECO:0000269|PubMed:12454087}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011080441.1
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by brassinosteroid, auxin and ethylene, and repressed by abscisic acid. Insensitive to gibberellic acid. {ECO:0000269|PubMed:12454087}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011080441.10.0transcription factor BEE 1-like
SwissprotQ8GWK72e-59BEE3_ARATH; Transcription factor BEE 3
TrEMBLA0A2G9GHD71e-108A0A2G9GHD7_9LAMI; Uncharacterized protein
STRINGMigut.D00641.1.p1e-106(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA39712344
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73830.12e-61BR enhanced expression 3
Publications ? help Back to Top
  1. Skinner MK,Rawls A,Wilson-Rawls J,Roalson EH
    Basic helix-loop-helix transcription factor gene family phylogenetics and nomenclature.
    Differentiation, 2010. 80(1): p. 1-8
    [PMID:20219281]