PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011079700.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family ARR-B
Protein Properties Length: 455aa    MW: 50793.2 Da    PI: 6.5602
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011079700.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like67.81.8e-21243291554
         G2-like   5 rWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYR 54 
                     +Wt eLHe+F++ave+L G+ +  Pk+ile+m+v+gLt+ +v+SHLQk R
  XP_011079700.1 243 EWTLELHEKFMDAVEEL-GEGRCFPKEILEIMNVPGLTRMQVASHLQKCR 291
                     7****************.9*****************************98 PP
2Response_reg44.67.5e-16361411107
                     EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS
    Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 
                     vl+vd e + + +  ++le  +y +v+ ++ +++a+ +l   +  +D+++  i+ p+++G++ll++  + +  lp+++++a ++  +a +al+ G
  XP_011079700.1  36 VLLVDHESDGLVNTVKLLELCQY-RVTFVELASAAISMLLSGKtrFDVVMANINSPDLHGFKLLQHAVSLG--LPVVLMSADDNTFMAMRALENG 127
                     89999999999************.***************666666*******************9887766..********************** PP

                     ESEEEESS--HHHH CS
    Response_reg  94 akdflsKpfdpeel 107
                     a  ++ Kp  +e l
  XP_011079700.1 128 AFLYIKKPATMEML 141
                     ********988877 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF521721.71E-2031155IPR011006CheY-like superfamily
Gene3DG3DSA:3.40.50.23004.9E-2233156No hitNo description
SMARTSM004486.3E-1434145IPR001789Signal transduction response regulator, receiver domain
PROSITE profilePS5011028.0435149IPR001789Signal transduction response regulator, receiver domain
PfamPF000724.5E-1136141IPR001789Signal transduction response regulator, receiver domain
CDDcd001568.48E-1437149No hitNo description
PROSITE profilePS5129411.942233295IPR017930Myb domain
SuperFamilySSF466897.17E-15238291IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.5E-20238292IPR009057Homeodomain-like
TIGRFAMsTIGR015571.3E-18242292IPR006447Myb domain, plants
PfamPF002491.6E-7243290IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 455 aa     Download sequence    Send to blast
MVWEFGNNVN VWGDVRSSSA PPVASYHHAM MHEIHVLLVD HESDGLVNTV KLLELCQYRV  60
TFVELASAAI SMLLSGKTRF DVVMANINSP DLHGFKLLQH AVSLGLPVVL MSADDNTFMA  120
MRALENGAFL YIKKPATMEM LRCLWQHVLR EKTRMIRERD ILVGANHGQG SRGLDVKGVA  180
INHRTVENPN DIIEGMVGMR NKGKSKKKYR GIRIGVDEDE EYESENHMMM GGDNNVKRKM  240
CTEWTLELHE KFMDAVEELG EGRCFPKEIL EIMNVPGLTR MQVASHLQKC RNDNWRSPEE  300
RKAFQAAHNG SSSSVGPQPK PRRFGSKPQL GRTVPNQVQQ ETRGAQPSPE TLSEAGMSQG  360
VGVVPVMANN TNQQQYGTPV PDPNVDSLIQ NYPGMQQGSG MNNPNPDPET YHTNPVYQEQ  420
KCGGGASADR KRSNWSSETS NFESDDSESR GHHDE
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011079700.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011079700.10.0two-component response regulator ARR14-like
TrEMBLA0A2Z7CBP51e-126A0A2Z7CBP5_9LAMI; Uncharacterized protein
STRINGMigut.D00936.1.p1e-158(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8132384
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16110.12e-41response regulator 2