PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_011077547.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
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Family | G2-like | ||||||||
Protein Properties | Length: 262aa MW: 29948.1 Da PI: 7.9052 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 90.6 | 1.4e-28 | 11 | 65 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+rl+Wt+eLH+ F +av+q+GG+++AtPk il++m ++gLt+ hvkSHLQkYR+ XP_011077547.1 11 KERLKWTKELHDLFEKAVNQIGGPDRATPKGILKAMAIPGLTIFHVKSHLQKYRM 65 68****************************************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 5.2E-27 | 9 | 66 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 4.93E-17 | 10 | 65 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 1.4E-22 | 11 | 65 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 7.7E-8 | 13 | 64 | IPR001005 | SANT/Myb domain |
Pfam | PF14379 | 3.8E-18 | 98 | 142 | IPR025756 | MYB-CC type transcription factor, LHEQLE-containing domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 262 aa Download sequence Send to blast |
MGSNRSNGSS KERLKWTKEL HDLFEKAVNQ IGGPDRATPK GILKAMAIPG LTIFHVKSHL 60 QKYRMSVFTR EEDHIRGKFE RRSALEMLPN FSATSGAQLN EALLIQMEAQ RRLNDQLEVQ 120 KSLKMKIEAQ GRFLDKIMEE YKNRAPSTKL VKPYSPILSL PSLSEESDQS NGKEFESDSE 180 EVDTNEMISR DEFRAQKRIK IQDNVLPQTQ KHPSFAPDMP NLTMFSLDAM HNNLYAEQEM 240 GFPWSIGAFP SPLQPAIYYP TN |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6j4k_A | 1e-19 | 11 | 68 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4k_B | 1e-19 | 11 | 68 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_A | 1e-19 | 11 | 68 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_B | 1e-19 | 11 | 68 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_C | 1e-19 | 11 | 68 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_D | 1e-19 | 11 | 68 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_A | 1e-19 | 11 | 68 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_C | 1e-19 | 11 | 68 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_D | 1e-19 | 11 | 68 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_F | 1e-19 | 11 | 68 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_H | 1e-19 | 11 | 68 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_J | 1e-19 | 11 | 68 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_011077547.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011077547.1 | 0.0 | myb family transcription factor PHL7 | ||||
Refseq | XP_011077550.1 | 0.0 | myb family transcription factor PHL7 | ||||
Refseq | XP_020549678.1 | 0.0 | myb family transcription factor PHL7 | ||||
TrEMBL | A0A022QJI3 | 1e-139 | A0A022QJI3_ERYGU; Uncharacterized protein | ||||
STRING | Migut.L02017.1.p | 1e-140 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA10101 | 20 | 26 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G01060.1 | 2e-48 | G2-like family protein |