PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011077053.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family G2-like
Protein Properties Length: 459aa    MW: 50817 Da    PI: 5.0713
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011077053.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like107.19.9e-34247301155
         G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                     k+r+rWtpeLHe Fv+av++LGGsekAtPk +l+lm+v+gLt++hvkSHLQkYR+
  XP_011077053.1 247 KARMRWTPELHEVFVDAVNKLGGSEKATPKGVLKLMNVEGLTIYHVKSHLQKYRT 301
                     68****************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466894.3E-18244301IPR009057Homeodomain-like
PROSITE profilePS5129411.601244304IPR017930Myb domain
Gene3DG3DSA:1.10.10.602.0E-31245302IPR009057Homeodomain-like
TIGRFAMsTIGR015572.9E-25247301IPR006447Myb domain, plants
PfamPF002496.0E-10249300IPR001005SANT/Myb domain
PfamPF143793.6E-22329376IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 459 aa     Download sequence    Send to blast
MPPAAFKKKY SETQSSEMEA SGAMSRSLSI LPSPVKEKFP QLPDSPQVTL AQELTSNIVP  60
SFRSPCSSNQ KMVGNLFSSA PGCPSGLGCS SLSPNTNRWM SSPFYSISPR DGVSFPSTQL  120
SVSIVENNDV PWNVDAIENF LDMPLNIPVQ NGPIETSTGI MSSEDRAKKT DWQDWTDQLI  180
RVNDDALDSN WSDLLVDVDV PDPDPKLLDL PPDVSTCQPQ IHQAHPHPVP SGESCPVIDS  240
PTATSTKARM RWTPELHEVF VDAVNKLGGS EKATPKGVLK LMNVEGLTIY HVKSHLQKYR  300
TARFKPESSE EKKSNTGSEM TSLDLETTMG ITEALRLQME VQKQLHEQLE IQRNLQLRIE  360
EQGKHLQMIF EQQKKMEEEK LRALSNSDKH SEPSEDNHAS IKDVASDVCI PVDEHPSKKE  420
TSSEAKPCKE RAPDDRGCSP PMKRAKAYET VTSGASHES
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A7e-31247305260Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B7e-31247305260Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A7e-31247305260Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C7e-31247305260Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D7e-31247305260Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F7e-31247305260Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H7e-31247305260Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J7e-31247305260Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011077053.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011077053.10.0protein PHR1-LIKE 1-like isoform X2
TrEMBLA0A2G9H1I11e-170A0A2G9H1I1_9LAMI; Uncharacterized protein
STRINGMigut.F02036.1.p1e-145(Erythranthe guttata)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G29000.23e-78G2-like family protein