PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011076888.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family ERF
Protein Properties Length: 357aa    MW: 39228.6 Da    PI: 4.2792
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011076888.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.61.8e-19111159254
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkle 54 
                     +y+GVr++k +g+W+AeIrdp     + kr++lg++ taeeA +a++  r+++e
  XP_011076888.1 111 KYRGVRQRK-WGKWAAEIRDPI----QhKRVWLGTYNTAEEASRAYELKRLEFE 159
                     8*******9.**********82....46**********************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.105.2E-23111168IPR001471AP2/ERF domain
CDDcd000184.29E-24111151No hitNo description
SMARTSM003802.5E-21111174IPR001471AP2/ERF domain
PROSITE profilePS5103221.364111168IPR001471AP2/ERF domain
SuperFamilySSF541714.71E-18111168IPR016177DNA-binding domain
PfamPF008471.3E-13111160IPR001471AP2/ERF domain
PRINTSPR003671.4E-10112123IPR001471AP2/ERF domain
PRINTSPR003671.4E-10134150IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 357 aa     Download sequence    Send to blast
MPEPRKPVPL NKETISRKQK FKPEPSRPMR KVRIICNDPD ATDSSDDEEV REKKVKRIIH  60
EVCLPIGEPT RVSKSTESES SVQDSNNGEK SSKKKRVLPL IESKPSPVTG KYRGVRQRKW  120
GKWAAEIRDP IQHKRVWLGT YNTAEEASRA YELKRLEFEA LANSTDFSSE KSSNDENDTP  180
VCSVVVSKPT ENLKQQNDAA LCVSEDSSGS AVSLTSHTSP SSVLELDSLT SAVNVKCEDE  240
KPIDASAEAN VVEQEVTVAD TGLMDEELMA LAQIGEELDL DMELHSLVAG GDFAPSLDDF  300
VDGFDDLPIC GFDDGDNPGA LPDFDFDFDL DACNEAFAWM DDAPTLMSGA TLNIACP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A9e-141101701374Ethylene-responsive transcription factor ERF096
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011076888.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011076896.10.0ethylene-responsive transcription factor ERF118
TrEMBLA0A2G9GJ621e-174A0A2G9GJ62_9LAMI; Uncharacterized protein
STRINGMigut.E00335.1.p1e-106(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA29572351
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.26e-34ERF family protein