PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_011076824.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
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Family | G2-like | ||||||||
Protein Properties | Length: 328aa MW: 37828.4 Da PI: 10.0685 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 102.6 | 2.5e-32 | 59 | 112 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtpeLH +Fv+ave+LGG+e+AtPk +l+lm+vkgL+++hvkSHLQ+YR+ XP_011076824.1 59 PRLRWTPELHLCFVHAVERLGGEERATPKLVLQLMNVKGLSIAHVKSHLQMYRS 112 8****************************************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 8.0E-31 | 54 | 113 | IPR009057 | Homeodomain-like |
PROSITE profile | PS51294 | 12.852 | 55 | 115 | IPR017930 | Myb domain |
SuperFamily | SSF46689 | 1.2E-15 | 56 | 113 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 2.4E-23 | 59 | 114 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 8.3E-10 | 60 | 111 | IPR001005 | SANT/Myb domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 328 aa Download sequence Send to blast |
MENSRTRPPP QMIEQEEKTD QDSSRPMNGN SSSNSTVEEN NGRKVNSGSV RQYTRSKTPR 60 LRWTPELHLC FVHAVERLGG EERATPKLVL QLMNVKGLSI AHVKSHLQMY RSKKIDDPNQ 120 VLSEHRLLLD AGDRHIYNLS QLPVLQTPNQ TPISSLRYRD AIWGSSQSNS MYRTGGLARN 180 ALYHDHSSFN FHTNAQSSWK LHQTDQRQNV VNQRYWQPQI ATTKLVQDRG REDAIRSHSP 240 FRPHEKTPMI MGRSESLKRQ LNSYNDQLNL DLNLSLETTR GKEKKLKMCF KNIDDDHDDD 300 VDSSLSLSLF SPSKKEIRQK STTLDLRL |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6j4k_A | 4e-18 | 60 | 114 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4k_B | 4e-18 | 60 | 114 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_A | 4e-18 | 60 | 114 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_B | 4e-18 | 60 | 114 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_C | 4e-18 | 60 | 114 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_D | 4e-18 | 60 | 114 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_A | 4e-18 | 60 | 114 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_C | 4e-18 | 60 | 114 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_D | 4e-18 | 60 | 114 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_F | 4e-18 | 60 | 114 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_H | 4e-18 | 60 | 114 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_J | 4e-18 | 60 | 114 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
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Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_011076824.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011076824.2 | 0.0 | uncharacterized protein LOC105160975 | ||||
TrEMBL | A0A2Z7A5C4 | 5e-99 | A0A2Z7A5C4_9LAMI; Uncharacterized protein | ||||
STRING | XP_009791663.1 | 1e-70 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA8573 | 21 | 29 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40260.1 | 3e-47 | G2-like family protein |