PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_011076647.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
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Family | ERF | ||||||||
Protein Properties | Length: 375aa MW: 40934.6 Da PI: 5.121 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 61.7 | 1.7e-19 | 89 | 139 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 + y+GVr++ +g+WvAeIr+p + r +lg+fgta eAa a+++a+k+++g XP_011076647.1 89 CNYRGVRQRT-WGKWVAEIREP-----HrgSRLWLGTFGTALEAALAYDEAAKAMYG 139 56*****999.**********6.....337***********************9986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF00847 | 2.4E-14 | 89 | 139 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 3.63E-30 | 89 | 147 | No hit | No description |
Gene3D | G3DSA:3.30.730.10 | 7.4E-30 | 90 | 148 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 21.232 | 90 | 147 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 1.44E-20 | 90 | 147 | IPR016177 | DNA-binding domain |
SMART | SM00380 | 4.4E-35 | 90 | 153 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.9E-9 | 91 | 102 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.9E-9 | 113 | 129 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 375 aa Download sequence Send to blast |
MSVETVERDT KMAVLGQDSN LVSQPVDYTR KRKSRSRRSG TKSVAETLAK WKEYNTTLDS 60 DNKMVRKAPA KGSKKGCMKG KGGPENARCN YRGVRQRTWG KWVAEIREPH RGSRLWLGTF 120 GTALEAALAY DEAAKAMYGV CARLNFPSYS SSKDSAKESS SLLTTSASES TNSSISDVCL 180 GEVRPKLGIA EIKGENGLQI SQKPALNEAS TPMSVVKEEV EEEAQTGEVK EGKGEDVKKE 240 SMECLYDSGF NPMDKPYPED RSAMAPLHQF NNFPLDEMFD VDELLAALDA APRQASGHQV 300 GPGAYGGHPS EAACGSGSFA DMSARWQHSG SELFGSEQTT SGYENGLDFL KPGRQEDYNF 360 LLSDLFLDLD SDLAI |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1gcc_A | 6e-17 | 90 | 147 | 2 | 60 | ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1 |
Search in ModeBase |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 28 | 33 | TRKRKS |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_011076647.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011076647.1 | 0.0 | dehydration-responsive element-binding protein 2A-like | ||||
TrEMBL | A0A2G9G1C7 | 1e-112 | A0A2G9G1C7_9LAMI; Uncharacterized protein | ||||
STRING | Migut.F00629.1.p | 1e-94 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA3701 | 24 | 45 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G05410.2 | 3e-33 | DRE-binding protein 2A |