PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011076647.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family ERF
Protein Properties Length: 375aa    MW: 40934.6 Da    PI: 5.121
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011076647.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.71.7e-1989139155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 
                     + y+GVr++  +g+WvAeIr+p     +   r +lg+fgta eAa a+++a+k+++g
  XP_011076647.1  89 CNYRGVRQRT-WGKWVAEIREP-----HrgSRLWLGTFGTALEAALAYDEAAKAMYG 139
                     56*****999.**********6.....337***********************9986 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008472.4E-1489139IPR001471AP2/ERF domain
CDDcd000183.63E-3089147No hitNo description
Gene3DG3DSA:3.30.730.107.4E-3090148IPR001471AP2/ERF domain
PROSITE profilePS5103221.23290147IPR001471AP2/ERF domain
SuperFamilySSF541711.44E-2090147IPR016177DNA-binding domain
SMARTSM003804.4E-3590153IPR001471AP2/ERF domain
PRINTSPR003671.9E-991102IPR001471AP2/ERF domain
PRINTSPR003671.9E-9113129IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 375 aa     Download sequence    Send to blast
MSVETVERDT KMAVLGQDSN LVSQPVDYTR KRKSRSRRSG TKSVAETLAK WKEYNTTLDS  60
DNKMVRKAPA KGSKKGCMKG KGGPENARCN YRGVRQRTWG KWVAEIREPH RGSRLWLGTF  120
GTALEAALAY DEAAKAMYGV CARLNFPSYS SSKDSAKESS SLLTTSASES TNSSISDVCL  180
GEVRPKLGIA EIKGENGLQI SQKPALNEAS TPMSVVKEEV EEEAQTGEVK EGKGEDVKKE  240
SMECLYDSGF NPMDKPYPED RSAMAPLHQF NNFPLDEMFD VDELLAALDA APRQASGHQV  300
GPGAYGGHPS EAACGSGSFA DMSARWQHSG SELFGSEQTT SGYENGLDFL KPGRQEDYNF  360
LLSDLFLDLD SDLAI
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A6e-1790147260ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12833TRKRKS
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011076647.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011076647.10.0dehydration-responsive element-binding protein 2A-like
TrEMBLA0A2G9G1C71e-112A0A2G9G1C7_9LAMI; Uncharacterized protein
STRINGMigut.F00629.1.p1e-94(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA37012445
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G05410.23e-33DRE-binding protein 2A