PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011076499.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family ERF
Protein Properties Length: 309aa    MW: 33998.9 Da    PI: 7.0188
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011076499.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2605.6e-192575256
             AP2  2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkklege 56
                    ++ GVr+++ +grWvAeI+d      ++ r +lg+f+tae+Aa+a+++a+++l+g+
  XP_011076499.1 25 KFVGVRQRP-SGRWVAEIKD----SlQKVRLWLGTFDTAEDAARAYDNAARQLRGA 75
                    899******.7*********....4456*************************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003804.9E-352588IPR001471AP2/ERF domain
CDDcd000182.92E-312582No hitNo description
Gene3DG3DSA:3.30.730.104.1E-292582IPR001471AP2/ERF domain
PROSITE profilePS5103220.4682582IPR001471AP2/ERF domain
SuperFamilySSF541712.35E-202583IPR016177DNA-binding domain
PfamPF008478.5E-132574IPR001471AP2/ERF domain
PRINTSPR003679.2E-82637IPR001471AP2/ERF domain
PRINTSPR003679.2E-84864IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    Send to blast
MKQTTSASDD GVRVRRKTSS RGHHKFVGVR QRPSGRWVAE IKDSLQKVRL WLGTFDTAED  60
AARAYDNAAR QLRGANARTN FDLPQSGPSL AELENAEPFS FDAMCRTEEP EGLVGALKAK  120
LFNKKGTQPF SAQFSFTGSM LLNNIAKNNQ LSPATSTKNH VMNPVQIYNQ NIDQLQIQDR  180
SDRNGEKIDA AMSQTVNPVG STSSLVSPGE PQLTWPVQVN HVLEDACASR TCTWPPLDLA  240
YQYNPLSEVL ELSKKTGNNV QVNAAANSWV SLPCLDSQYG YNESNNWVSS GNIAWDSELH  300
CVVPSVLGQ
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A6e-1523811271Ethylene-responsive transcription factor ERF096
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011076499.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012851986.11e-105PREDICTED: ethylene-responsive transcription factor RAP2-12-like
TrEMBLA0A4D8YLP21e-102A0A4D8YLP2_SALSN; EREBP-like factor
STRINGMigut.F00403.1.p1e-104(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA118691819
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.13e-19related to AP2 11