PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011076492.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family ARR-B
Protein Properties Length: 671aa    MW: 73317.6 Da    PI: 6.2033
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011076492.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like78.96.3e-25212264255
         G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                     p++ Wt+ LH+rF+ea++++ G ++A+Pk+ile+m+v+gLt+e+v+SHLQkYR+
  XP_011076492.1 212 PKVIWTNSLHNRFLEAIRSI-GLDRAVPKKILEVMDVPGLTRENVASHLQKYRI 264
                     899*****************.********************************6 PP
2Response_reg75.42.1e-25241321109
                     EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS
    Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 
                     +l+vdD+ + +++++ +l+k +y +v +++++ +al +l+ k   +Dl++ D+ mp+m+G+el + i++e  +lp+++++a ++e+ al+ l+ G
  XP_011076492.1  24 ILVVDDDTTCLSIVAAILKKFKY-QVVTVKHPNDALCTLRIKGgaFDLVVSDVHMPDMNGFELQRAIAQEF-NLPVVLMSADDKESVALQGLESG 116
                     89*********************.9999********999666556**********************9999.9********************** PP

                     ESEEEESS--HHHHHH CS
    Response_reg  94 akdflsKpfdpeelvk 109
                     a  f+ Kp+ p++l++
  XP_011076492.1 117 AAFFIYKPVCPDDLRD 132
                     *************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF521723.42E-2921138IPR011006CheY-like superfamily
Gene3DG3DSA:3.40.50.23003.2E-3221169No hitNo description
SMARTSM004487.6E-2522134IPR001789Signal transduction response regulator, receiver domain
PROSITE profilePS5011034.45723138IPR001789Signal transduction response regulator, receiver domain
PfamPF000721.3E-2124132IPR001789Signal transduction response regulator, receiver domain
CDDcd001561.58E-2425138No hitNo description
PROSITE profilePS512949.781208267IPR017930Myb domain
Gene3DG3DSA:1.10.10.601.7E-25208268IPR009057Homeodomain-like
SuperFamilySSF466896.99E-18209268IPR009057Homeodomain-like
TIGRFAMsTIGR015577.7E-24212264IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 671 aa     Download sequence    Send to blast
MEGETLITLS NSPESRKAVD TISILVVDDD TTCLSIVAAI LKKFKYQVVT VKHPNDALCT  60
LRIKGGAFDL VVSDVHMPDM NGFELQRAIA QEFNLPVVLM SADDKESVAL QGLESGAAFF  120
IYKPVCPDDL RDLWQFAAMK KKSQVVIEET GNFPDEKTST DKNSSDEMAI SASSSVSGDV  180
VNKKESKRKS PRKEGSNEIK GDNSQSSSQK RPKVIWTNSL HNRFLEAIRS IGLDRAVPKK  240
ILEVMDVPGL TRENVASHLQ KYRIFLRRVS DASFKIQYSS EKGLSRNYSS FQTSATSPST  300
LMLNRFSKFH YQNPVQFPAQ SVAALPNLET PSGSLISQSG FGQSRLLSNK GNLLKPNIGN  360
ANLIHQNDRS YVRLAQNDYQ TAPSSTSIQG HHANISLDDP STSLSASSDS PLVGSTRMNP  420
CTSYDHPSRT TIGTPNSVSL APSKNFTYRT NYVGYSISNI KHLAESGHSE KYKDLNSCTS  480
TINFPSNEFL SNSNTVLAAA GPNNNVNFNQ LAHNLGACST FVTNNNGGEQ LSDVVADYLP  540
SNLPLVCGTV GNGGDINESA AFSPMFDLSE FDILSTQQAL EETDFDTTFA DQVKIQNQTQ  600
QNGGETITSS NFYGDMSLWD SNIRSFGQAP NQQQCSQSLV NSQDFGASSQ HNKTVLLPPP  660
QACLLYYTNQ V
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1irz_A1e-22207270164ARR10-B
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011076492.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011076492.20.0two-component response regulator ARR10-like
TrEMBLA0A2G9GTH60.0A0A2G9GTH6_9LAMI; Uncharacterized protein
STRINGMigut.F01146.1.p1e-151(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA32902038
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16110.19e-61response regulator 2